LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele33g1331	ATGAAGATTTTTGTGGTGCTTCTCTTTCTCTTCTTCTCCATGTTTGTTACTCTAAGCTCTGCAGATTCTTCGTCTTCTCCATCTGTTAAGAATTCCACGTGCCCCATGGATCTGAACTATGTGCTGAGAATCCCGTGGAACTCTTCCATGTGCCAAAACTTCCATACTTTGGATTCCGTTGGCGACACTCAAAGAAGCCATTGTTGCCAAACTTTACTTTCCCTAATTGGCATAGGGCTTGCTCAACACCTTAAACAAACCTCCTTGTTCAACCTCCCAGATCTTCGTACCTCCAATTCTTGCCTCCATGACTTCCAATCCAAGCTCTCTTCCCTCTCTCTCCCTGATTACCTCACCTCCGCTTGCTTTGACCCGCTTCAATTTGTTGTTAGCCGCAACGTCTGCGCCGAAATCCAAACGATTCCTGATTGGGTCGGTAAGCTCGGAGAAACGACGCCCCTTAACCGGGGATGTAAGCCGGACCTTACTGATCTTACTCTCTGTGGCGCGTGCGTGGCGGCGGGGTTTCAGGTTCAGCAGGAACTCACAAGTATTGATGGTAACTCTTCCCACGCCACAAATTGCTTTCAATATGCTATTTTGTATGCTGCTGGTATTGTGAATGAGTTTGGGCCGGAGAGTTATGGTGCTGTGACATGCATTTTTGGCATGTCAGTTTATTCAACTTCGGATTCTGGAGGAAGTGGTCACCATCAAGCTCTTGTGTTTGGGATAACCGGAGCTTCGGTTGGATTGTTAGTCATGTTCGCTTTGTTGGGTTTGTATCTATGGTATGATAGGAAGTGGAGGAGGAGAAAACATGAGAATTTTGGGTTTGATATTGATCCTGAAGAGCAAGGATCTAGGCGTAGATTGAGGCCGAATACTGGATCAATCTGGTTTAAGATCGAGGAGCTCGAGAAGGCTACTAATGGTTTCTCATCTAAGAACTTCATAGGAAGAGGTGGATTCGGGATGGTTTACAAGGGAACTTTGGCTGATGGATCAATTGTCGCGGTTAAAAGGATCTTGGAATCCGATTATCAAGGGGATGCTGAGTTTTGCAATGAGGTTGAGATCATTAGTAATCTGAAGCACCGTAATCTGGTACCACTTAGAGGGTGCTGTGTGGGGGACGAGGGTGAGACTTATGAGGAAAGAGATCAAAGATATCTTGTTTATGATTACATGCCAAATGGTAACCTTGAAGACCATCTCTTCTCATCATCATCAGTGGGCAATCAGAATGAAAAGAGATCATTGACTTGGCCACAGAGAAAAAGCATAATCTTGGATGTGGCAAATGGGTTGGCTTACTTGCATTATGGAGTTAAGCCTTCAATTTATCACAGAGACATCAAGGCCACCAATATACTACTCGACGCCGATATGAGGGCCAGAGTTGCAGATTTCGGGCTTGCTAAGCAGAGCAGGGAAGGTCAGTCTCATCTCACTACTAGAGTTGCCGGAACTCATGGATATCTAGCCCCGGAGTATGCACTATATGGTCAGCTTACTGAGAAGAGTGATGTCTATAGCTTCGGTGTGGTTGTTTTGGAGATAATGTGTGGGAGAAAAGCTCTTGATTTGTCTTCATCAGGATCTCCAAGGGCATTCTTGATCACAGATTGGGCATGGTCATTGGTTAAATCTGGGAACATAGATGAGGCATTAGACGCTTCCCTTGTAAAAGATGGCCAATGTCCTAGTTCGAATCCTAAGAGCATAATGGAAAGGTTTTTGCTTGTGGGGATTCTATGTTCTCATGTGATGGTTGCTTTGAGGCCAACGATTTCTGAAGCTTTGAAGATGTTGGAAGGTGATGCCGAAGTTCCAGAAATCCCCGACCGGCCTATGCCTCTCGGGCATCCTTTATTTTACAATGATGGTAACAATACTTTTAGCATATCTCCAGCATTAAGCGGCCCAAAATTGCATAGTGGAGACATGCTTAGGTAA	1959	0.4507	MKIFVVLLFLFFSMFVTLSSADSSSSPSVKNSTCPMDLNYVLRIPWNSSMCQNFHTLDSVGDTQRSHCCQTLLSLIGIGLAQHLKQTSLFNLPDLRTSNSCLHDFQSKLSSLSLPDYLTSACFDPLQFVVSRNVCAEIQTIPDWVGKLGETTPLNRGCKPDLTDLTLCGACVAAGFQVQQELTSIDGNSSHATNCFQYAILYAAGIVNEFGPESYGAVTCIFGMSVYSTSDSGGSGHHQALVFGITGASVGLLVMFALLGLYLWYDRKWRRRKHENFGFDIDPEEQGSRRRLRPNTGSIWFKIEELEKATNGFSSKNFIGRGGFGMVYKGTLADGSIVAVKRILESDYQGDAEFCNEVEIISNLKHRNLVPLRGCCVGDEGETYEERDQRYLVYDYMPNGNLEDHLFSSSSVGNQNEKRSLTWPQRKSIILDVANGLAYLHYGVKPSIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSSGSPRAFLITDWAWSLVKSGNIDEALDASLVKDGQCPSSNPKSIMERFLLVGILCSHVMVALRPTISEALKMLEGDAEVPEIPDRPMPLGHPLFYNDGNNTFSISPALSGPKLHSGDMLR	652

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele33g1331	652	Pfam	Protein kinase domain	315	531	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g1331	652	Pfam	SPARK	30	196	IPR043891	-
	Lele33g1331	652	SUPERFAMILY	Protein kinase-like (PK-like)	293	606	IPR011009	-
	Lele33g1331	652	Gene3D	Transferase(Phosphotransferase) domain 1	397	614	-	-
	Lele33g1331	652	ProSitePatterns	Protein kinases ATP-binding region signature.	319	341	IPR017441	GO:0005524
	Lele33g1331	652	Gene3D	Phosphorylase Kinase; domain 1	284	396	-	-
	Lele33g1331	652	PANTHER	OS01G0750732 PROTEIN	50	613	-	-
	Lele33g1331	652	FunFam	probable receptor-like protein kinase At1g11050	273	396	-	-
	Lele33g1331	652	FunFam	probable LRR receptor-like serine/threonine-protein kinase RKF3	397	613	-	-
	Lele33g1331	652	CDD	STKc_IRAK	319	607	-	-
	Lele33g1331	652	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	448	460	IPR008271	GO:0004672\|GO:0006468
	Lele33g1331	652	SMART	serkin_6	313	605	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g1331	652	ProSiteProfiles	Protein kinase domain profile.	313	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele33g1331	Lele-ChrLele33	23972722	23974680	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele33g1331	24	652	Receptor kinase-like Gene Family	AT1G11050	65.342	0.0	801

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RKF3	Lele33g1331		Pkinase	4.5e-44	CL0016