Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1314 ATGGATATGAGAGGTCGTCCTCGCGTTGTCGTCAACGGCGTTCTAAGAACCAGAAACTTCCATTACTTCTGGTGCCAAACTTGCCAGCGCGCCGTCAGAATCCCCTCCTCTGCAAACCCTGATTTCTCTTTCTGCCCCTTTTGCTCCCATCAATTACACATCGAACTCGATATCGCGAGGCCTCTCATGAATAATCCTCCTAATAATTCACAACCTTCACCTGCTGCTCAATTGATCAATGGATTGGCTCTCATTCTGGATCCATCTACGAGAGAGCGAAACACTCGATTGCATCGAACAGTTCAATCGATTGAAGAAACCGAAGAAGGACCGAATCCTCAGACCTGGATCACTCTCCGATTTGTGAGACCAACTCGTCCACAAAGACACATTCCGGGAACCACCGACGACAACAGGCCGCCTCCGGCAGCAGATTCCGCCATCGAAGGGTTGCCGACTGTGAAACTAACGGAAACACGATTGGCGAGCGATCCGAATTGTGCCATTTGCAAAGACGAATTTCAGATTCATATGGAAGTGAAAGAGTTACCGTGCAAGCATTTATATCATTCGGATTGTATTACTCCTTGGCTTCGCATTCACAATACGTGTCCAATCTGCCGTCACGAGCTGCGAAGCGCTTCGTCGTCTTCTTCTTCTTCTTATTCTAATTACCGTCGTGAAGATGATTTCTCACATTTTGACTATCGATATGGATTTAGGTTTGAAGAAGCTACACACGGTTTGAATTGGCTTTGGAGCCAGCTGGTTTCTTTGCGACCTGTGCGTGCAGTTATGGAATGGACTCAGAGATATTTGTTTGATTTCCATGAAAATCATGATCATCCAGGAGGTAAGCTTCTGTGA 867 0.466 MDMRGRPRVVVNGVLRTRNFHYFWCQTCQRAVRIPSSANPDFSFCPFCSHQLHIELDIARPLMNNPPNNSQPSPAAQLINGLALILDPSTRERNTRLHRTVQSIEETEEGPNPQTWITLRFVRPTRPQRHIPGTTDDNRPPPAADSAIEGLPTVKLTETRLASDPNCAICKDEFQIHMEVKELPCKHLYHSDCITPWLRIHNTCPICRHELRSASSSSSSSYSNYRREDDFSHFDYRYGFRFEEATHGLNWLWSQLVSLRPVRAVMEWTQRYLFDFHENHDHPGGKLL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1314 288 Pfam Ring finger domain 166 208 IPR001841 -
Lele33g1314 288 FunFam E3 ubiquitin-protein ligase RING1-like 132 214 - -
Lele33g1314 288 ProSiteProfiles Zinc finger RING-type profile. 167 208 IPR001841 -
Lele33g1314 288 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 103 211 - -
Lele33g1314 288 SMART ring_2 167 207 IPR001841 -
Lele33g1314 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 214 IPR013083 -
Lele33g1314 288 SUPERFAMILY RING/U-box 147 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1314 Lele-ChrLele33 23848739 23849605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1314 6 273 C3H Transcription Factor Family AT1G68180 36.630 3.05e-40 138