Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1307 ATGTATGCCGCCAAGCGCAGGCGCGGGAAGCCCAAGCTTGACCGCCGAAACGCCATGAAGAACATCGATTACCGAGTTCCCGCTTCCTTAGCTGCCTCATTCGACGATTCCTCCTCCCCAGATTTTCAATCTCCTTCGCCCCTTGATCTTTCCCATTCCCTCGATAAACAAACCAGCATTCGTGTCCAGGGCGTCGACGGCGAATTCGAATTGATTTTCCGTAGCCTTGGGCTTTCTGGCCCGGACGATTTCTCCATTCCGGTTGATGCTTGGGAGGCTCAAAGGTCTCGCAATATTTTTTCTCAATTGCCGGAAAAGAAGGCTGAGGATGAGAAACTGGTGAAACTTGAGTCTAGGGTTTCGATTAAGAGTGATGTTCAAGAGCCTCGTCATCAAGGGCAACTCGGGGAGAGTGATGTTCCTTCTGATTCGAAGCCTCTTGGGGGTGGGGGAATCAAGGGTGCCAGGCCTCCCGTCCTTTCAACGCCGCCGGTCATGCGGCCGCCGATGGTTGATGACGGGAGATCTACTTGGGACTTAGTGAGGTCTTTATCAGATGGTGTTATTGATAATGATTCACCGATTCGTAATGGGGGAATTAGTTCTTCCGCTGAGGAAGACGAAGTGCGCGTCGAGGAAAATGAAGGTGGTGATCAAGGAATTGATGGTGAGGAAGAATCACATAGTGCGAGACATGGGGAAAGCAATCTTCTTTCAGATTCTTGTTCATCTACGTCCCGTGACGACGAAGAAAGTGATGCAGTTGGTCATCAGGATTCTGGTGAGGTTGACGAATCGGTTTACAATGTCTCTCCGCATGGTTCATTTAGACGCATTTTCAAATCTTGGCAAAAGGGTGAGATTTTGGGGAAGGGATCATTTGGAACGGTGTATGAAGGCTTCACAGATGATGGATTCTTTTTTGCCGTAAAGGAAGTGTCTTTGCTAGATCAAGGAGCTCAAGGAAAACAGAGCATTTTCCAACTTCGGCAGGAAATATATCTTTTGAGTCAATTTGAACATGAGAACATTGTTCGATATCTTGGCACTGACTGGGATAAAAATATGCTATACATCTTCCTAGAGCTTGTAACCAAAGGGTCTTTGGCAAGACTCTATCAAAAGTATCATCTAAGGGACTCTCAAGTTTCTTCATACACAAGGCAGATTTTAAGTGGTTTAAAGTATCTTCATGATCGCAATGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAATGGGTCAGTAAAGCTTGCTGATTTTGGGCTAGCCAAGGCAACCACTATGAATGATGTTAAATCAAGCAAAGGCTCCCCGTATTGGATGGCTCCTGAGGTTGTAAATCTAAGAAGCCGTGGTTATGGCCTAGCAGCTGATATATGGAGCTTGGGATGCACTGTTTTGGAGATGTTGACTCGTCAACCTCCTTACTCTCATTTGGAAGGAATGCAAGCTTTATTTCGGATTGGTAGAGGTGAACCTCCACCTGTTCCAGAATCTTTATCAAAAGATGCCCGAGATTTCATTCTCAAGTGCCTGCAAGTTAACCCTAGTAGGAGGCCAAATGCGGTCGAGTTATTGGATCATCCATTTGTGAAGAGGCCATTTCTATCTCCTATGAGTCCTGCTTCTCTGCATATTAATAATTTAAGGCTAGAAGCCAGCGAGAACTTCTCAAAGTGGGTGTTCAGGTGGAGATATCCATTAGCGCGCCCATTTTGATGTTTACTGAACTGGGCATGTCAATATTCAGCTAGTTTGGCTATAATCTTACCAACGATGCTGGTGTCTAGTGAAGGTAGAATCGAAGAGGTGGGGCTTTGTGAGATTAAGATTTTCAAGGTTCAAAAGATCTCGGCTTACTGCAGAATGAAAATTGAAAAGGCAACAACTTCATACCAAGGGACTAGACACTCTTCAAGGAGAAGATAG 1944 0.4542 MYAAKRRRGKPKLDRRNAMKNIDYRVPASLAASFDDSSSPDFQSPSPLDLSHSLDKQTSIRVQGVDGEFELIFRSLGLSGPDDFSIPVDAWEAQRSRNIFSQLPEKKAEDEKLVKLESRVSIKSDVQEPRHQGQLGESDVPSDSKPLGGGGIKGARPPVLSTPPVMRPPMVDDGRSTWDLVRSLSDGVIDNDSPIRNGGISSSAEEDEVRVEENEGGDQGIDGEEESHSARHGESNLLSDSCSSTSRDDEESDAVGHQDSGEVDESVYNVSPHGSFRRIFKSWQKGEILGKGSFGTVYEGFTDDGFFFAVKEVSLLDQGAQGKQSIFQLRQEIYLLSQFEHENIVRYLGTDWDKNMLYIFLELVTKGSLARLYQKYHLRDSQVSSYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATTMNDVKSSKGSPYWMAPEVVNLRSRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGEPPPVPESLSKDARDFILKCLQVNPSRRPNAVELLDHPFVKRPFLSPMSPASLHINNLRLEASENFSKWVFRWRYPLARPFXCLLNWACQYSASLAIILPTMLVSSEGRIEEVGLCEIKIFKVQKISAYCRMKIEKATTSYQGTRHSSRRR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1307 647 SUPERFAMILY Protein kinase-like (PK-like) 279 563 IPR011009 -
Lele33g1307 647 MobiDBLite consensus disorder prediction 1 20 - -
Lele33g1307 647 FunFam Mitogen-activated protein kinase 1, putative, expressed 281 549 - -
Lele33g1307 647 Gene3D Transferase(Phosphotransferase) domain 1 281 562 - -
Lele33g1307 647 Pfam Protein kinase domain 284 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1307 647 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Lele33g1307 647 MobiDBLite consensus disorder prediction 123 268 - -
Lele33g1307 647 ProSiteProfiles Protein kinase domain profile. 283 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1307 647 SMART serkin_6 283 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1307 647 MobiDBLite consensus disorder prediction 32 53 - -
Lele33g1307 647 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 540 - -
Lele33g1307 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Lele33g1307 647 MobiDBLite consensus disorder prediction 214 233 - -
Lele33g1307 647 MobiDBLite consensus disorder prediction 244 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1307 Lele-ChrLele33 23791663 23796244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1307 152 540 MAP Kinase Kinase Kinase AT4G08500 55.696 1.71e-133 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele33g1307 Pkinase 1.8e-68 CL0016