Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1288 ATGGCTGCCATTATACCCTGTGGCTTGGTATCCCTTAACCATGCAAGAGTAGCTCCAAGACCAATGGAAGCATATTATGAAGATGATCATAAACAAACCACCCCAACTCCAACCGAAGAAACCGATCAGCTCGACTACTCTCAGAGGGCTCCATGGCTTCGTGCTGCGATATTGGGAGCCAATGATGTTTTGGTTTCAGTTGCAGCACTGACGATGGGTGTAGGAGCTGTTAAAACAAATGTAGAAGCAATGATGCTTTCTGGTTTTGCAGGGTCAGTAGCAGGAGCTTGCAGTATGGCAATAGGAGAGTTTGTGTCAGTTTACACTCAGCATGATGTTGAAGCTGCACAGATGAAGGGGGAAAAGAGTGATGAAGAGTATGATGAAAAGAAGCAGAAGGAGAAGATGAAGGATATGAAGGTGAAGCTGCCAAATCCATAG 441 0.4535 MAAIIPCGLVSLNHARVAPRPMEAYYEDDHKQTTPTPTEETDQLDYSQRAPWLRAAILGANDVLVSVAALTMGVGAVKTNVEAMMLSGFAGSVAGACSMAIGEFVSVYTQHDVEAAQMKGEKSDEEYDEKKQKEKMKDMKVKLPNP 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1288 146 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 31 145 IPR008217 GO:0005384|GO:0030026
Lele33g1288 146 MobiDBLite consensus disorder prediction 25 45 - -
Lele33g1288 146 Pfam VIT family 53 138 IPR008217 GO:0005384|GO:0030026
Lele33g1288 146 MobiDBLite consensus disorder prediction 115 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1288 Lele-ChrLele33 23677442 23677882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1288 40 130 Nodulin-like Gene Family AT3G43630 69.149 6.82e-39 129