Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1281 ATGGCTGCCATTCCAACTTGTGGCTTGGTAACCCTTAACCATGAAGAGGATTATAAACAAATACTCAATCAAAGGGCGAAATGGCTTCGCGCTGCAGTATTGGGAGCCAATGATGGTTTGGTTTCAGTTGCAGCACTGATGATGGGAATAGGAACAGCTAAAGCAGATGTGAAAGTCATGCTGCTGGCTGGTTTTGCAGGGACGGTAGCAGGAGCTTGCAGTATGGCAATAGGAGAGTTTGTGTCAGTTTACTCTCAGTATGAAGTTGAAGCTGCACAGATGAAGAGGGAAATGAGTGATGAAAATGCTGAAGAGAAGAAGAAGGATATGAATATGAAGCTTTCAGATCCATTCCAAGCAGCATTTGCATCAGCATTGTCATTTAGCATAGGAGCATTGGTTCCTCTGCTTGCTGCTGCATTCATAACAAATTATAAGATAAGGCTAATAGTGGTTGTCATTGTGGCTACTTTAGCTCTCACAGCATTTGGATATATGGGAGCTGTGTTGGGAAAGACTAACATTTTGAGATCTTGTGTGAGGCTTGTGTTTGGGGGATGGATAGCCATGGTCATCAGTTTTGGGTTAACCACAGTACTGTGTTCTTGGGGACTAGAGCTGTATGGATGA 630 0.4349 MAAIPTCGLVTLNHEEDYKQILNQRAKWLRAAVLGANDGLVSVAALMMGIGTAKADVKVMLLAGFAGTVAGACSMAIGEFVSVYSQYEVEAAQMKREMSDENAEEKKKDMNMKLSDPFQAAFASALSFSIGALVPLLAAAFITNYKIRLIVVVIVATLALTAFGYMGAVLGKTNILRSCVRLVFGGWIAMVISFGLTTVLCSWGLELYG 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1281 209 Pfam VIT family 109 197 IPR008217 GO:0005384|GO:0030026
Lele33g1281 209 Pfam VIT family 29 108 IPR008217 GO:0005384|GO:0030026
Lele33g1281 209 CDD Nodulin-21 27 173 - -
Lele33g1281 209 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 200 IPR008217 GO:0005384|GO:0030026
Lele33g1281 209 Coils Coil 84 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1281 Lele-ChrLele33 23627692 23628321 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1281 10 205 Nodulin-like Gene Family AT3G43660 59.091 7.67e-79 233