Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1280 ATGGCAGATACCGTAGTTAGTTTCGTGCTGGAGAACCTGTCTCGTCTTGTGGCACACGAAGCCAATTTGCTATGTGGCGTGGAGGACAAAGTGAAGTTCCTTGAGAGTGAGCTCAGAATGATGACAGTCTTCCTCAGGAGCTGCGAGCAGAACAGGAGTACGAAGGAAATAGAACATGAGGTTGTTCGTCAAATCACAGATGTCGCACATGAAGCTGAGGATGTCATCGACACCTTTGTCGCCAACGTTGCTAGCCATAGAAGGAGAAGTTGGTTGTCCAGGATGCTCCATGGTGTTCACCATGCAAAGCTTCTGCACCATGTGGCAGAGAAAATAGACAACATTAAAGTGGCCATCGATCACATTTATGAGAACAGAATCAAATACGACACCCAGGATGCAGCAGGTTCTTCAACAGATCAGGAGTTACAACTACTGCATAAGCGAAGACGGGATGTGGAGGAAGATGACGTGGTGGGTTTTCAGAATGACACAACTGAAGTAATCAATCGGCTCAAGCAAGGGGGTTCGCGTCGTAATGTGGTGTCCATCATAGGTATGGGCGGATTAGGTAAAACTACTCTTGCTCGCAAGATTTATAACAGTCATCTTGTCAAGAATTACTTTGATTGTCATGCTTGGGTTTATGTGTCTAATGACTATAGACCTGGAGAGCTTTTACTCGCCCTTCTTAAATGCTTCATGACATTCTCTGCAAATACATGCTATAATAACAAAAGTAAAAGCAAGCATCAGAAGAAATCAAAGGGTAAAGGCAAAGCTGAATCTGATGATTTTTACAGTTTAAGTGAGGAAGAACTTAGAGACAAGGTACGAGAATGTTTGAAGGGGAAGAGGTATCTTGTTGTCTTGGATGACATATGGAATCCTCAACATTGGGATGAATTACATCATGCTTTTCCAGATGACAATAAAAGCAGCAGGATCCTGATTACTAGTCGTTTGAAAGAGGTGGCTTCTCATGCCAGCTCTTCTCCTCCCTACTATCTACCTTTTCTTAATGAAGAAGAAAGTTGGGAGCTTTTCTCAAAGAAGGTGTTTCGAGGAGAAGGCGTGCCTTCTCATCTCAAGCTAGTGGGTAAGAGCATGGTAAAAAGTTGTCGTGGCTTGCCAATTTCCATTGTTGTACTTGCAGGAATTCTAGCAAACAAGGAGAAGTCATACCGAGAATGGTCCAAGATCATGGGCCATGTCAACTCGTATCTCACTCGACCAGAAACTCAAGTACACGATATAGTACTTAAACTCAGTTATGATAGCTTGCCTCCAAGATTGAGGCCATGCTTTCTATATTTTGGCATGTTTCCTGAAGACTACGAGATTCCTGTTGGACGCTTGATCCAACTATGGGTCGCCGAAGGATTCATTCTTCACAATGATTCCAGAGTTGCAGAGGACGTTGCAGAGGACTACTTGGATGAGCTCATTGATCGAAGCTTAATCCAAGGAGGGAGAAGAAGAAGCGATGGGGGGATCAAGACGTGTCGCATCCATGATCTTCTAAGAGAACTTTGCATATCTGAGAGCAGGGAGGAGAAGGCTTTTGAAGTTTGTAGGGATGTAGACATTTTGGAGCAAACCAAACCTTGTAGGCTGTCCATTCAATGCAATATGTCTGATTTTCTTGTTTCAAGCAACAAAGATGGTTCAAGCACTCGTTCTATGATGTGCTTTTACCGGGACTCCTACTACGACTTTGACTCGAGAAAGTCAGAAAGGCTTGTGAAATGCTTTCGGCTTGTTCGAGTGTTGGATCTAGGGCTTCCAATGTCCTGTGAGCGTAAGATCCCTACCAATTTAAACATGTTAGTGCATCTAAGGTACTTAAGAATAGACCTAGAAACAAGCTTTTATAAAGGATTTGTCAGAGCGTTTCCTAAATTCATGTGCAATCTTTGGAACCTAGAAACTTTAGACTTGGGGCATTCTCGATTTATCACATCTATACCTTTTTCTAGTAATATGTGGAAGCTTAAGAGACTAAGACATCTTCATACGTTTGGACCCGTGATTTTACCCGAGTTTCCAGATGTAGAAACTAAAACCATGTGGAATCTACAAACCCTATCTTGTGTTGCCGTAAACAAAGGATCAGCCGTTGTGTCTCTAATAGGGAAAGGTGTATTCCCAAAGCTTAGGAAATTGGGGTTGCATTTCTGTAAGGATGATGACAAGCATAAAGAAGGGTTTATTGGAGTGTGGGAAAACCTTCCAAACCTAAATCATCTGAATGCATTGAAGATTCATGGCTTTCCTGATATTCCAACATCTATCAACGCCTTTCCTTTGAACCTTAGCAAGCTAGCAATCTCAAGCACCAAAGTAAATAACGATGTCATGAGCACTTTGGGGAGCCTTACCAACCTCAGAATTTTGAAACTATGTGATGGTGATATGTTTACAGAAGCCTCAAGGTCTGAGTCAGAGCTTTGTTGCATTAATGGGTTTCCACAACTAGAGGTATTAAAAATGAAATATTTGAAGAACCATCGCTGGGAGTTAGGTAAAGATGTAATGCCATGTCTTAGATATTTGATCATTGAAGATTGCAGCAATTTGAGTGCTCTCCCTGACCAGCTATGGTCCCTGACTTCCTTACGAGAGGTACAAGTAGCGGGGCCCTCTGAATCACTGAAGAAGCAGCTCCAAAGTCAACCAATGAGAGATGGCTGCAATCTCATCATCTTCAAAGGTTTGTGGGAGAAAGCAAGAGAGAATGTTCGGTATGTATATTTATAG 2760 0.4243 MADTVVSFVLENLSRLVAHEANLLCGVEDKVKFLESELRMMTVFLRSCEQNRSTKEIEHEVVRQITDVAHEAEDVIDTFVANVASHRRRSWLSRMLHGVHHAKLLHHVAEKIDNIKVAIDHIYENRIKYDTQDAAGSSTDQELQLLHKRRRDVEEDDVVGFQNDTTEVINRLKQGGSRRNVVSIIGMGGLGKTTLARKIYNSHLVKNYFDCHAWVYVSNDYRPGELLLALLKCFMTFSANTCYNNKSKSKHQKKSKGKGKAESDDFYSLSEEELRDKVRECLKGKRYLVVLDDIWNPQHWDELHHAFPDDNKSSRILITSRLKEVASHASSSPPYYLPFLNEEESWELFSKKVFRGEGVPSHLKLVGKSMVKSCRGLPISIVVLAGILANKEKSYREWSKIMGHVNSYLTRPETQVHDIVLKLSYDSLPPRLRPCFLYFGMFPEDYEIPVGRLIQLWVAEGFILHNDSRVAEDVAEDYLDELIDRSLIQGGRRRSDGGIKTCRIHDLLRELCISESREEKAFEVCRDVDILEQTKPCRLSIQCNMSDFLVSSNKDGSSTRSMMCFYRDSYYDFDSRKSERLVKCFRLVRVLDLGLPMSCERKIPTNLNMLVHLRYLRIDLETSFYKGFVRAFPKFMCNLWNLETLDLGHSRFITSIPFSSNMWKLKRLRHLHTFGPVILPEFPDVETKTMWNLQTLSCVAVNKGSAVVSLIGKGVFPKLRKLGLHFCKDDDKHKEGFIGVWENLPNLNHLNALKIHGFPDIPTSINAFPLNLSKLAISSTKVNNDVMSTLGSLTNLRILKLCDGDMFTEASRSESELCCINGFPQLEVLKMKYLKNHRWELGKDVMPCLRYLIIEDCSNLSALPDQLWSLTSLREVQVAGPSESLKKQLQSQPMRDGCNLIIFKGLWEKARENVRYVYL 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1280 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 439 IPR027417 -
Lele33g1280 919 Pfam Rx N-terminal domain 5 90 IPR041118 -
Lele33g1280 919 SUPERFAMILY L domain-like 503 879 - -
Lele33g1280 919 CDD RX-CC_like 2 122 IPR038005 -
Lele33g1280 919 Pfam NB-ARC domain 164 425 IPR002182 GO:0043531
Lele33g1280 919 FunFam Probable disease resistance protein At1g63360 425 514 - -
Lele33g1280 919 Gene3D - 5 110 - -
Lele33g1280 919 Gene3D - 137 333 IPR027417 -
Lele33g1280 919 Gene3D - 339 424 IPR042197 -
Lele33g1280 919 PANTHER DISEASE RESISTANCE PROTEIN RP 27 858 IPR044974 GO:0006952
Lele33g1280 919 Gene3D - 425 515 IPR036388 -
Lele33g1280 919 FunFam Probable disease resistance protein At1g61300 141 333 - -
Lele33g1280 919 PRINTS Disease resistance protein signature 374 388 - -
Lele33g1280 919 PRINTS Disease resistance protein signature 181 196 - -
Lele33g1280 919 PRINTS Disease resistance protein signature 637 653 - -
Lele33g1280 919 Gene3D Ribonuclease Inhibitor 737 895 IPR032675 -
Lele33g1280 919 Gene3D Ribonuclease Inhibitor 570 736 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1280 Lele-ChrLele33 23621894 23624653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1280 182 520 WRKY Transcription Factor Family AT5G45050 25.656 1.70e-09 60.1