Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1272 ATGGGAGATTCAGAGCATCACAAGAATGCGAATCTTCCTCCTGGGTTTCGGTTTTATCCTTCAGATGAAGAGCTCGTTGTTCACTTCCTTAACAGAAAAGCTTCCCTCTTGCCTTGCCACCCAGATGTCATCCCTGATCTTGACCTCTTCCCCTACGATCCTTGGGACCTTCATGGTAAGGCTTTGGGAGAAGGGAATCAATGGTACTACTTCAGCAGAAGGACACAGAATAGGGTCACTAATAATGGCTGTTGGAAGTCAATGGGAATGGAAGAGCCAATACTTACAAACTCAGGAAGTACACCTATTGGAGTGAAGAAATATTTCATCTTCTTCATGGGAGAATCTCCTTCTGGTATCAAAACCAATTGGATAATGCAGGAGTATCGTCTATCAGATTCTTCTTCTTCTTCTTCATCTTCTTCTTCTAGCAGATCATCATCAAAGAGAAGATCCAAAACAGATCACTGTAAATGGGTGATTTGTCGAGTTTATGAGCGTGACAACGATGATAACGATGGTGATAATGATGGAGGAACTGAGCTCTCATGTTTGGATGAAGTTTTCTTGTCACTGGATGATCTTGATGAAATCAGCCTTCCCAATTAG 609 0.422 MGDSEHHKNANLPPGFRFYPSDEELVVHFLNRKASLLPCHPDVIPDLDLFPYDPWDLHGKALGEGNQWYYFSRRTQNRVTNNGCWKSMGMEEPILTNSGSTPIGVKKYFIFFMGESPSGIKTNWIMQEYRLSDSSSSSSSSSSSRSSSKRRSKTDHCKWVICRVYERDNDDNDGDNDGGTELSCLDEVFLSLDDLDEISLPN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1272 202 FunFam NAC domain-containing protein 104 21 170 - -
Lele33g1272 202 ProSiteProfiles NAC domain profile. 12 167 IPR003441 GO:0003677|GO:0006355
Lele33g1272 202 SUPERFAMILY NAC domain 8 166 IPR036093 GO:0003677|GO:0006355
Lele33g1272 202 Gene3D NAC domain 21 172 IPR036093 GO:0003677|GO:0006355
Lele33g1272 202 Pfam No apical meristem (NAM) protein 13 131 IPR003441 GO:0003677|GO:0006355
Lele33g1272 202 PANTHER NAC TRANSCRIPTION FACTOR 56 12 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1272 Lele-ChrLele33 23538797 23539694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1272 1 169 NAC Transcription Factor Family AT1G61110 41.341 1.07e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele33g1272 NAM 6.3e-28 No_clan