Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1256 ATGGAAGTTTTATACTTAAGTTCAATTCTATTTCCTAAGCCCTCTAATGGGCTTAATCCTCTTTCAAAAAAGTGGCAAAGCCGAAGGCTTACTGCTCGACATGTTTCATGTAGAACAAGAAAGTTAACTACCGAGATTGAAGAGACGACATCTGAAGACTTTTACAAGATACTATCAGTGAATCCAAAGAGTGCAACCCAAGATGAAATAAAGAAGGCTTATAGATCTATGGCACTTCAGTATCACCCCGACGTGTGCCAAGACCCTTCCAGGAAGGAGAAGTGGACGAGGATGTTTGTGCAGCTCCATGCGGCTTACAAGACATTGTCGGATCCGGTGCTCCGAGAAGAGTATGATCATGAACTTGGCTTGATCACAAGAAAGAGGAACAATAAGAGTGTTAACGGTGGTGGTGATGAAAGATGGAGAAGAAGGTGGGAAGAGCAAGTGGTTGAGTTGAAGAGAAGGTCTGATACAAGGATGGCTCAAAAGGAAAAATCATCATGGGGTAGTAAAATTAGGGCCCAAAACATGAAAAATCATAGCTAA 549 0.4208 MEVLYLSSILFPKPSNGLNPLSKKWQSRRLTARHVSCRTRKLTTEIEETTSEDFYKILSVNPKSATQDEIKKAYRSMALQYHPDVCQDPSRKEKWTRMFVQLHAAYKTLSDPVLREEYDHELGLITRKRNNKSVNGGGDERWRRRWEEQVVELKRRSDTRMAQKEKSSWGSKIRAQNMKNHS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1256 182 MobiDBLite consensus disorder prediction 153 167 - -
Lele33g1256 182 Pfam DnaJ domain 53 119 IPR001623 -
Lele33g1256 182 Gene3D DnaJ domain 41 150 IPR036869 -
Lele33g1256 182 SMART dnaj_3 52 114 IPR001623 -
Lele33g1256 182 ProSiteProfiles dnaJ domain profile. 53 122 IPR001623 -
Lele33g1256 182 CDD DnaJ 53 111 IPR001623 -
Lele33g1256 182 PRINTS DnaJ domain signature 74 89 IPR001623 -
Lele33g1256 182 PRINTS DnaJ domain signature 56 74 IPR001623 -
Lele33g1256 182 PRINTS DnaJ domain signature 94 114 IPR001623 -
Lele33g1256 182 MobiDBLite consensus disorder prediction 168 182 - -
Lele33g1256 182 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 29 180 - -
Lele33g1256 182 SUPERFAMILY Chaperone J-domain 39 118 IPR036869 -
Lele33g1256 182 MobiDBLite consensus disorder prediction 153 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1256 Lele-ChrLele33 23402205 23402753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1256 55 119 C2H2 Transcription Factor Family AT1G74250 38.806 3.77e-06 44.7