Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1254 ATGGAAGTTTTATCCTTAAGATCATCCCTAATTGTTCCCTATAAGCCCTCCCATGTCCTTAATCCACTCTCAAAAAATTGGCAAAGCCAAAGGCTCCATGTTCGACATGTTTCATGCAAAGCGAAAACGTTAGCTATTAAGGTAGAAGAGACAGCGTCTATAAACTTTTACAAGATGCTATCTTTGAATCCCGAGAGCGCAACCAAAGACGAGATAAAGAAGGCTTATAGATTGATGGCGCTTCAGTACCACCCAGACATGTGCCGAGACCCTTCGACGAAGGAGAACTGTACGAGGATGTTTGTGCAGCTCCATGCGGCTTATGAGACATTGTCGGATCCGGTGCTCCGAGAAGAGTATGATCATGAACTTGGCTTGATCACAAGAAAGAGGAACAATAAGAGTCTTAATGGTGGTGGTGAAAGATGGAGAAGAAGTTGGGAAGAGCAATTGGTTGAGTTGAAGAGAAGATCTAATACAAGAATGGCTCAAAAGCAGGAATCTTCATGGGGAAGTAGAATTAGGGCTCAAAACATGAAAACTCAAAACTAA 552 0.4257 MEVLSLRSSLIVPYKPSHVLNPLSKNWQSQRLHVRHVSCKAKTLAIKVEETASINFYKMLSLNPESATKDEIKKAYRLMALQYHPDMCRDPSTKENCTRMFVQLHAAYETLSDPVLREEYDHELGLITRKRNNKSLNGGGERWRRSWEEQLVELKRRSNTRMAQKQESSWGSRIRAQNMKTQN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1254 183 SMART dnaj_3 54 116 IPR001623 -
Lele33g1254 183 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Lele33g1254 183 ProSiteProfiles dnaJ domain profile. 55 124 IPR001623 -
Lele33g1254 183 MobiDBLite consensus disorder prediction 163 183 - -
Lele33g1254 183 MobiDBLite consensus disorder prediction 158 183 - -
Lele33g1254 183 CDD DnaJ 55 113 IPR001623 -
Lele33g1254 183 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 30 182 - -
Lele33g1254 183 Gene3D DnaJ domain 43 151 IPR036869 -
Lele33g1254 183 PRINTS DnaJ domain signature 76 91 IPR001623 -
Lele33g1254 183 PRINTS DnaJ domain signature 96 116 IPR001623 -
Lele33g1254 183 PRINTS DnaJ domain signature 58 76 IPR001623 -
Lele33g1254 183 SUPERFAMILY Chaperone J-domain 49 120 IPR036869 -
Lele33g1254 183 Pfam DnaJ domain 55 121 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1254 Lele-ChrLele33 23396467 23397018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1254 57 121 C2H2 Transcription Factor Family AT1G74250 43.284 4.93e-07 47.0