Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1214 ATGATGTGGATTTCAGGAACTTCAGAGGCATGGCGGAGTGTTGGCTGTTGGCTGAAATTATGGGTTTGGAGTTATCTTCAGCAATTACAACACGAGGCCCAGCATCGGTGGTTGCGGCCTGCTGAAATATGTGAAATTCTCCGCAATTATCGGATGTTTCAAATTACTTCAGAACCTCCAAGCAGGCCCCCAGTGTCTACAAAATTGAAGTACATTTGGGTGTCTGTTTTGGACACTGAAAATGTTGTCTTTGGAGAAAAGTGGGAAGTGTTGATGTGTTACATTGCTACTATGCCCATGGGGAAAAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACCCAAGAATTTTGGATTACACTCATTTTGGATCACACATAAGGAATGGTTCTCTGAGCAGCAAGATTACTGCAAATTGTGATCATGGACAGCCATCGGTTTCTGGAGCAAATTATATCCCACTTGTTCAGGGAGAAAAAACCGGAGGAAGCAATGTATCCTTTGTTGAGGGCCAAAACGTCCATGGTATGGCCTCCTGGGACAGTGTGTTGGACCTATGTACTGCGGGATTACACACTGATCCAAATCTTGCATCATTTCCTTCTGTCCCACCCTATTCAGTCGGGAACATTCTTGAACAAGAAACTGCTCTAGGTGATCTTTTAGCAAGTAAGGGTAACCTAGCTGAGGAGGCAGGGAAATCTCAGTCTTTTCAATCAAATTGGCAGATTCCTTTTGAAGACAATCCAGGACAGTTGCATAAATGGCCAATAACCCAATTGTTGAGTTCTGAATATGGATCTGATTTTACCCCTAGTTTACTAGAGCATGAATCTCATATAGCAGGTCCTGAAATTGCTTCTGACCTGTTAACTTTTAATGGCCAGATAAGAGAACAACTTTTACAGGAAAACTTTTCAGAACAGCATACAGATGCACAATATCAATTTTCTCTGAAATCTAATTCTGAGAATGAGAATGCTTTCACTATGAAACGCCCATTATTAGAGGTAGATGATAGGCTGAAGAAAGTTGACAGCTTTTCCCGGTGGGTTAGTAAAGAACTTCCAGAGGTGGATGATCTACGTATGCAATCCTCATCTGGTATTTCATGGAGCACAGATGAATGTGGGCAGGTTATAGATGATTCTTCATTGAGTCCCTCAATCTCACATGACCAGCTGTTCAGCATATATGATTTTTCACCTAAATGGGCTTATGGTGATTCTGAAACTGAGGTTTTGATCATTGGAACATTTTTGAAGAATCAACCAGTGGTGGCAAATTGCAACTGGTCTTGTATGTTTGGGGAAGTTGAAGTTCCTGCTGAGATTTTGGCCAATGGAGTTTTGTGTTGTCCTGCTCCACCTCATAAGGCTGGAAGGTTCCCCTTCTATGTAACATGTTCCAATAGGTTAGCTTGCAGTGAAGTGAGGGAATTTGATTACAGAGACGGCTTTGGTAAAGATGTAGAAGTTGAAGATATTTACCGCAGCTCATTTGAAATGCTGGTTTATTTGCGATTGGAAGTGTTACTATCTTCAAAATCAGTGCACCCAAATGACAAGTCATTTGATAATGATGAAGAGAAAAGAAGCTTGATTTATAAGCTTGTTTCATTGAAGGAAGAAGAGGAGTATTTAAATAAGGAGGAGACAGCTTTAGATAGGGACATGTACCAGCAGAAGGTAAAGGAGCAGCAATTTCACGGACAAGTTAAAGAGAAGCTGTACTCATGGCTACTTCACAAAGTAGCTGAAGATGGTAAAGGACCAAATATCTTAGATGAGGAGGGACAGGGTGTGCTACATCTAACAGCTGCTCTTGGTTATGATTGGGCCATAGCACCAATTATTATATCTGGAGTTAATATCAATTTCCGGGATGTAAATGGATGGACGGCTCTGCATTGGGCTGCCTCTTGTGGCAGTGATTGCTATGTTGCTCTTCTTGTCACCATGGGTGCAAACCCTGGAGCGGTGACCGATCCATCTCCAGAATTTCCTTCTGGTAGAACACCTGCAGATCTTGCTTCTAGCAATGGACACAAGGGAATCTCGGGCTTCCTTGCAGAGTCTTCATTAACTAGCCACCTTGCATCTCTCACAGTGGATGACCTTAAGAGAGATAGTGGTCAAGAAGCTTCAGGAATGAAAGCAGTACATGGTGTTTCGGAACGTTCCGCAACACCTTTGTTTTATGGTGATGTACCCGATGCTCTATGCCTTAAGGATTCTCTCACTGCTGTTCGTAATGCTACACAAGCAGCTGTTCGTATACATCAAGTGTTCAGAATGCAGTCATTCCAACGGAAGCAGTTAACTGAATATAAGGATGGTGAGTTTGGACTGTCAGATCCACGAGCTCTTTCTCTTCTAGGTTCTAAGGCTGGCAAGGCTGGACAGGGAGATGGGTTAGCCCATGCTGCAGCAACACAAATACAGAAGAAGTTTCGTGGCTGGAAGAAGAGAAAAGAATTCCTAATAATTCGTCAAAGAATTGTTAAAATCCAGGCTCATGTTAGAGGGCATCAGGTAAGGAAGCAATACAAGTCAATCATCTGGTCTGTAGGAATCCTGGAGAAGGTCATATTGCGTTGGAGACGCAAGGGCAGTGGCTTACGTGGATTTCGACCTGATGCTGCTAACAAGGAACCTGTCCAACCTAATGAACCTTTGAAAGAGGATGATTATGATTTTCTCAAGGAAGGTAGGAAACAAAGTGAGGAAAAGTTCCAGAAGGCCCTTTTGAGGGTGAAGTCCATGGCTCAGTACCCTGAAGCACGGGCTCAATATCGACGGCTGCTGAATGTTGTCGAGGACTTCCGTCAGACTAAGGCATGCAATATGGACTTGACCGATTCAGAATGTGAAGCAGCTGATTCATATTGA 2898 0.4289 MMWISGTSEAWRSVGCWLKLWVWSYLQQLQHEAQHRWLRPAEICEILRNYRMFQITSEPPSRPPVSTKLKYIWVSVLDTENVVFGEKWEVLMCYIATMPMGKKMKIFRGEAIGCLNPRILDYTHFGSHIRNGSLSSKITANCDHGQPSVSGANYIPLVQGEKTGGSNVSFVEGQNVHGMASWDSVLDLCTAGLHTDPNLASFPSVPPYSVGNILEQETALGDLLASKGNLAEEAGKSQSFQSNWQIPFEDNPGQLHKWPITQLLSSEYGSDFTPSLLEHESHIAGPEIASDLLTFNGQIREQLLQENFSEQHTDAQYQFSLKSNSENENAFTMKRPLLEVDDRLKKVDSFSRWVSKELPEVDDLRMQSSSGISWSTDECGQVIDDSSLSPSISHDQLFSIYDFSPKWAYGDSETEVLIIGTFLKNQPVVANCNWSCMFGEVEVPAEILANGVLCCPAPPHKAGRFPFYVTCSNRLACSEVREFDYRDGFGKDVEVEDIYRSSFEMLVYLRLEVLLSSKSVHPNDKSFDNDEEKRSLIYKLVSLKEEEEYLNKEETALDRDMYQQKVKEQQFHGQVKEKLYSWLLHKVAEDGKGPNILDEEGQGVLHLTAALGYDWAIAPIIISGVNINFRDVNGWTALHWAASCGSDCYVALLVTMGANPGAVTDPSPEFPSGRTPADLASSNGHKGISGFLAESSLTSHLASLTVDDLKRDSGQEASGMKAVHGVSERSATPLFYGDVPDALCLKDSLTAVRNATQAAVRIHQVFRMQSFQRKQLTEYKDGEFGLSDPRALSLLGSKAGKAGQGDGLAHAAATQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKSIIWSVGILEKVILRWRRKGSGLRGFRPDAANKEPVQPNEPLKEDDYDFLKEGRKQSEEKFQKALLRVKSMAQYPEARAQYRRLLNVVEDFRQTKACNMDLTDSECEAADSY 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1214 965 Gene3D Immunoglobulins 393 488 IPR013783 -
Lele33g1214 965 ProSiteProfiles Ankyrin repeat profile. 633 665 IPR002110 GO:0005515
Lele33g1214 965 FunFam Calmodulin-binding transcription activator 2 808 856 - -
Lele33g1214 965 ProSiteProfiles Ankyrin repeat region circular profile. 633 659 - -
Lele33g1214 965 Gene3D - 558 704 IPR036770 -
Lele33g1214 965 FunFam Calmodulin-binding transcription activator 2 393 489 - -
Lele33g1214 965 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 239 947 - -
Lele33g1214 965 MobiDBLite consensus disorder prediction 878 898 - -
Lele33g1214 965 Gene3D - 809 856 - -
Lele33g1214 965 SUPERFAMILY Ankyrin repeat 589 694 IPR036770 -
Lele33g1214 965 SMART iq_5 808 830 IPR000048 GO:0005515
Lele33g1214 965 SMART iq_5 831 853 IPR000048 GO:0005515
Lele33g1214 965 SUPERFAMILY E set domains 400 486 IPR014756 -
Lele33g1214 965 ProSiteProfiles IQ motif profile. 809 838 IPR000048 GO:0005515
Lele33g1214 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 809 859 IPR027417 -
Lele33g1214 965 Pfam IQ calmodulin-binding motif 834 853 IPR000048 GO:0005515
Lele33g1214 965 Pfam IQ calmodulin-binding motif 810 829 IPR000048 GO:0005515
Lele33g1214 965 Pfam Ankyrin repeats (3 copies) 605 694 IPR002110 GO:0005515
Lele33g1214 965 ProSiteProfiles IQ motif profile. 832 856 IPR000048 GO:0005515
Lele33g1214 965 SMART ANK_2a 672 701 IPR002110 GO:0005515
Lele33g1214 965 SMART ANK_2a 633 662 IPR002110 GO:0005515
Lele33g1214 965 Pfam IPT/TIG domain 400 478 IPR002909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1214 Lele-ChrLele33 22641866 22653776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1214 158 965 CAMTA Transcription Factor Family AT5G64220 51.493 0.0 781