Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1212 ATGGATAACCTTTGTTGCTTCAACTCTGTCTCTCAGGTGGTTGGAGGACGTTCGTCAAGTAGCTCTGGCAAGGGCAGAAGCCATCAAAATCATGTCAAGTATGGCTTTAGCCTTGTCAAAGGGAAAGCAAACCACCCAATGGAAGACTATCATGTGGCAAAATTTGTCCATACCAAAGGGCAAGAGCTTGGACTTTTTGCAATATATGATGGACATTTGGGAGATAGCGTGCCAGCCTATCTACAAAAGAATCTCTTCTCTAATATCTTAAAAGATGAGGACTTTTGGACTGATACTGCCAGGTCCATTGTAAAAGCTTATGAGGCAACAGATAAAGCAATTCTTTCTCACAGTCCTGATTTGGGACGAGGTGGATCGACTGCAGTGACTGCAATTATTATAAATAATCAGAAGTTATGGGTAGCTAATGTTGGAGATTCACGCGCAGTTCTGTCAAAGGATGGGGTAGCAATACAAATGAGTATAGATCATGAGCCCAATACTGAGAGGGACAGCATTGAGGACAGAGGTGGTTTTGTCTCTAACATGCCAGGAGATGTTGCCAGAGTGAACGGCCAGCTCGCAGTTTCTCGAGCATTTGGAGACAAAAACCTCAAATCGCACTTGCGATCTGATCCTGACATACAGCAGGCTAACATTGACTCAGAGATGGAGCTTTTGATTCTGGCAAGTGACGGTCTATGGAAGGTTATGGAAAATCAAGAGGCAGTTGATATTGGAAGAAGGATAAAGGATCCCCAAAGGGCAGCCAAACAGCTAGTGGCAGAGGCATTGAACAGAGACAGCAAGGATGATATCTCTTGCATCGTAGTTCGTTTCAAGTCTTGA 849 0.4405 MDNLCCFNSVSQVVGGRSSSSSGKGRSHQNHVKYGFSLVKGKANHPMEDYHVAKFVHTKGQELGLFAIYDGHLGDSVPAYLQKNLFSNILKDEDFWTDTARSIVKAYEATDKAILSHSPDLGRGGSTAVTAIIINNQKLWVANVGDSRAVLSKDGVAIQMSIDHEPNTERDSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIQQANIDSEMELLILASDGLWKVMENQEAVDIGRRIKDPQRAAKQLVAEALNRDSKDDISCIVVRFKS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1212 282 SMART PP2C_4 29 278 IPR001932 -
Lele33g1212 282 SUPERFAMILY PP2C-like 27 281 IPR036457 -
Lele33g1212 282 FunFam Probable protein phosphatase 2C 39 23 281 - -
Lele33g1212 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Lele33g1212 282 PANTHER PROTEIN PHOSPHATASE 26 280 - -
Lele33g1212 282 Gene3D - 16 282 IPR036457 -
Lele33g1212 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Lele33g1212 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Lele33g1212 282 CDD PP2Cc 32 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1212 Lele-ChrLele33 22620884 22625856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1212 1 281 PP2C-type Phosphatase Gene Family AT1G22280 72.125 4.92e-151 422