Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1202 ATGAGACCAGCTCGTCCATACATGTTTATTAAGATGTTGTATGCACTGATATCATCTACACGTGATCTTTTCTCCATTAGTACTTCCTCCTTCTGTTCAAATTGGCCTAGCCTTCCATACAGGTTTAGCATACTGTTGAGAACACAAGTTTCTAGCAAAAAGGTGAGCAAGGCTCCTAAGATACAGAGACTGGTCACACCTTTGACCCTCCAAAGAAAGCGTGCAAGAATTGCACAGAAGAAGAAGAGAATTGCCAAGGCCAAGTCAGAAGCAGCTGAGTACCAGAAACTTCTCGCCTCAAGGTTGAAGGAGCAGAGGGAGCGCAGGAGCGAAAGTTTGGCCAAGAGGAGGTCCAAGCTCTCTATCGCTAAGCAATCCGTTGCAGCATAG 390 0.459 MRPARPYMFIKMLYALISSTRDLFSISTSSFCSNWPSLPYRFSILLRTQVSSKKVSKAPKIQRLVTPLTLQRKRARIAQKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSIAKQSVAA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1202 129 PANTHER 40S RIBOSOMAL PROTEIN S6 47 120 IPR001377 GO:0003735|GO:0005840|GO:0006412
Lele33g1202 129 MobiDBLite consensus disorder prediction 103 118 - -
Lele33g1202 129 Coils Coil 70 97 - -
Lele33g1202 129 MobiDBLite consensus disorder prediction 103 129 - -
Lele33g1202 129 Gene3D - 41 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1202 Lele-ChrLele33 22504927 22506769 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1202 52 123 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 87.500 2.06e-35 119