Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1201 ATGGCTTCCCTTCATCTTCCATGTCCATCTGGGCTAGAGATTGAAACAACGACGTTTAATGGGATGGAAGAAGAAGCCACACGTGGTCCAATAACAGAGAAGAAGAAGAAGAAGAGTGATGATATTATTATGGATGGCGGAGAGGAAAAGGGAATATGGCTGACTTGGAAGGATGTGTGGGTGACAGCTTCTTCTTCTTCAAGTGGGAAGAAGAAGAGGAAAGGGATTAATAATAATGGAAGAAAAGCAATACTTGAAGGTCTAAGTGGTTATGCAAAACCAGGCCAGCTTTTGGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATACTTTAGCAGGGAGATTGGGTTCAAACACAAGGCAAGCTGGGGAAATTCTTATTAATGGCCACAAACAAACACTGGCTTATGGCACCTCGGCATATGTAATGCAAGATGACACTTTACTCACAACCCTAACGGTTGGAGAAGCAGTTTACTATTCAGCTCAGCTTCAACTACCTGACACAATGACAATGGGACAGAAGAAGGAGAGAGCAGAGCTCACAATAAGAGAAATGGGTCTTCAAGACGCCGTTAACACAAGAATTGGAGGTTGGGGTTGTAAGGGAATAAGTGGAGGCCAAAAGAGAAGAGTTAGTATCTGCATAGAGATCCTTACACGTCCAAGACTTCTGTTTCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCCTCGTACTATGTCATGAGCAGAATTGCAAGCCTTGATCGAAAGGATAGGATTCAAAGGACTATTATTGCATCCATTCATCAGCCTAGTACTGAAGTTTTTCAGCTCTTTGATAATCTTTGTCTTCTTTCTTCTGGTAAAACTGTCTTCTTTGGTCCTGCTTCTGCAGCCAGCCAGTTCTTTGCTTCAAATGGTTTTCCTTGTCCGGCTCTCCAGAACCCATCTGATCATTTCTTGAAAACTATAAACAAGGATTTCGATGATGATCAGGACATTGAACTGGGCTTATCTACCAATCAAAGGAAACCCACAGAAGAAGCAATAGAAATGCTTGTGAAGTCATACAAGTCTTCTGATTTAAACCAACAAGTTCGAGCAGAAGTAGCAGCACTATCTTCACAGGGAAGTGGAATGGTGGAGGAGAAGAAGAAGAGAGGGCATGCAAGCTTCCATACGCAGTGCATTGTGCTTACAAAGAGATCATTCGTGAACATGCGTCGTGATTTAGGCTATTACTGGTTGCGCCTTGTCATATATGTCGCTGTGGCTATAGGTTTGGCCACTGTGTTCTATGATTTGGGCATGAGTGAAGGGTCTACTAAAGATAGATGTTCACTTCTTGCGTTTGTGTCTTCCTTCATAACTTTTATGACCATTGGTGGATTCCCTTCCTTTGTGGAAGACATGAAGGTATTTCAGAGGGAAAGGCTAAATGGTCACTATGGAGTGACAGCTTATGTGATAGGAAACACCTTATCTTCAATCCCATACCTAGTACTCGTCACTCTCATTCCTGGAGCCATAGCCTATTACCTCCCAGGCCTTCAAAAATCTGCAGAAAACTTCATCTTCTTCTGTGGCATCCTCTTTTCATGTTTAATGCTAGTTGAAAGCCTCATGATGATAGTGGCAAGCATTGTCCCTAACTTCCTCATGGGAATCATAACCGGTGCTGGTCTTCAAGGTATCATGATCCTTGCAGGAGGCTTCTTCAGATTGCCCCATGACCTTCCCAGAATCTTCTGGAAGTTTCCTCTCTTCTACGTCGCCTTCCATCGATACGCCTACCAAGGTCTGTTCAAGAACGAGTTTGAAGGACTCAGGTTTGGTGGTAGAAGTGGGGAGGAGATTCTGAGAAACATATGGCAAGTTAACATGAGTTATTCTAAGTGGGTTGATCTTGGGATTCTTCTGGGGATGATTGTGGTGTATAGAGTTGTGTTCTTGGTGATTATTAAGGGCACTGAGAAGATGAAGCCTGTAATTGCTTCTTTGCTTTCTGCGCCTGATCCTAAGAGAAGCATTCAGGTCATGGCCAATCCAAATGCTACTCCTTTACATGAAGGAGCTGCTTAA 2079 0.4343 MASLHLPCPSGLEIETTTFNGMEEEATRGPITEKKKKKSDDIIMDGGEEKGIWLTWKDVWVTASSSSSGKKKRKGINNNGRKAILEGLSGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQAGEILINGHKQTLAYGTSAYVMQDDTLLTTLTVGEAVYYSAQLQLPDTMTMGQKKERAELTIREMGLQDAVNTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDRKDRIQRTIIASIHQPSTEVFQLFDNLCLLSSGKTVFFGPASAASQFFASNGFPCPALQNPSDHFLKTINKDFDDDQDIELGLSTNQRKPTEEAIEMLVKSYKSSDLNQQVRAEVAALSSQGSGMVEEKKKRGHASFHTQCIVLTKRSFVNMRRDLGYYWLRLVIYVAVAIGLATVFYDLGMSEGSTKDRCSLLAFVSSFITFMTIGGFPSFVEDMKVFQRERLNGHYGVTAYVIGNTLSSIPYLVLVTLIPGAIAYYLPGLQKSAENFIFFCGILFSCLMLVESLMMIVASIVPNFLMGIITGAGLQGIMILAGGFFRLPHDLPRIFWKFPLFYVAFHRYAYQGLFKNEFEGLRFGGRSGEEILRNIWQVNMSYSKWVDLGILLGMIVVYRVVFLVIIKGTEKMKPVIASLLSAPDPKRSIQVMANPNATPLHEGAA 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1201 692 ProSitePatterns ABC transporters family signature. 208 222 IPR017871 GO:0005524|GO:0016887
Lele33g1201 692 Pfam ABC-2 type transporter 393 605 IPR013525 GO:0016020|GO:0140359
Lele33g1201 692 FunFam ABC transporter G family member 11 52 355 - -
Lele33g1201 692 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 41 667 - -
Lele33g1201 692 Gene3D - 68 306 IPR027417 -
Lele33g1201 692 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 300 IPR027417 -
Lele33g1201 692 Pfam ABC transporter 86 236 IPR003439 GO:0005524
Lele33g1201 692 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 54 311 IPR003439 GO:0005524
Lele33g1201 692 SMART AAA_5 94 288 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1201 Lele-ChrLele33 22496552 22503252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1201 84 272 Calmodulin-binding Proteins AT2G36910 30.256 7.14e-10 60.8