Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1187 ATGGGGCCTCTTCAGATTTGGGCATTTGGTGATGTTTATCAACTCACAAGGGCCAACCAGAACGCTCTCCCATCCACTGGGATCAAAATCATCCCCATTCCTAGAGGTGGAAAGAATACAGCCGATAGATCTCTTTTTATTGACCTTATGTATTGGGTTACCCAAAATCCTCCTCCGGCGCATTTGTTTCTAATTTCTGGTGATAGGGATTATGCTGAAGTATTACATCGTTTGAGAATGAATAACTACAATATCCTAATTGGTGGTATAGAGATTTCTAATGTTCTCTGCAGTATAGCAGCTATAGTGTGGCACTGGAATTCTTTACTTAGAGGAGAAAATATTGAAGGAAGACATTTCAATCATCCTCCTGATGGTTTGTATGGTGCTTGGTTTGAACTTACGTCCAATTCCAAAGGCAGTTGTGAGGCAGGAGTTGAATCTGTGGCTACTTCAATGGCCTCATCTCATGAACTTAGTGGGGAAGATATTCCAGATGTCCAACAGGTTGCAGATGTGGGTAAGACCGGGAGTCAATTGCCTCCTAAGGAGAATGAAATTCTTTACTCTAGTGATGCAGGTCAAGCTGTTGCAGAAAGTGCAGCTTGTCACATTGGTGGAAGAACTGAATCTGTGATTGCCAAAAGCAGTGGTGGAAGCAGGGAAACTGACAGCATTACTTTTAGCAAACGTCTAACTTTTGTGAGGGTTAGTCATTCTGAAGAGCTCCAGTCATTAGAACAGAGGCAAATAGCTAGTCAATTTAAGGAGCCCGAGTTATCAGAACTGAGACAGACAGTGACTCATTCAGGAGAGCCTAAGTTATTTTCTTGTAGTTCCTTGTGGGACGAAATGGAATCTTTTGTTTCCACCTCCAAAGGAGCAATTCTTGTCTTCCACTCAAGAAACAGCAGAACGACACAAAGTAACATGCTAAAATCATCAGAATGTGAAGTTGATAAAAAACGCAGTGTTCCTCATACTGTGGCTTCTTCACCTTCCAGTCAAAATGATCTTACAGAGAAATCTGCAACTCACATGTTAGCAGATGTTCAGAAACTTGTGTGA 1068 0.4176 MGPLQIWAFGDVYQLTRANQNALPSTGIKIIPIPRGGKNTADRSLFIDLMYWVTQNPPPAHLFLISGDRDYAEVLHRLRMNNYNILIGGIEISNVLCSIAAIVWHWNSLLRGENIEGRHFNHPPDGLYGAWFELTSNSKGSCEAGVESVATSMASSHELSGEDIPDVQQVADVGKTGSQLPPKENEILYSSDAGQAVAESAACHIGGRTESVIAKSSGGSRETDSITFSKRLTFVRVSHSEELQSLEQRQIASQFKEPELSELRQTVTHSGEPKLFSCSSLWDEMESFVSTSKGAILVFHSRNSRTTQSNMLKSSECEVDKKRSVPHTVASSPSSQNDLTEKSATHMLADVQKLV 355
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1187 355 MobiDBLite consensus disorder prediction 327 341 - -
Lele33g1187 355 PANTHER LIMKAIN B LKAP 2 304 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lele33g1187 355 MobiDBLite consensus disorder prediction 308 341 - -
Lele33g1187 355 CDD PIN_limkain_b1_N_like 2 87 - -
Lele33g1187 355 Pfam NYN domain 8 95 IPR021139 GO:0004540
Lele33g1187 355 Gene3D - 6 107 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele33g1187 Lele-ChrLele33 22357512 22359959 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1187 2 112 C2H2 Transcription Factor Family AT5G61190 42.857 1.61e-24 103