Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1173 ATGTGTTTTCCTTTTTATAGTGTGCAGCAGGTTATTGAAAAACATGATCAGCACTCAGAAATTGAAAGATTATATCATTCATCTGTTTTGTATGAAAAGGAGACCTTCAGCATGCTCAACAAGGAAGAAGCTCATAAGACTCAGGAATTGAGGCAGTTGAAGGGAGAAGAGCTTGAAGGATTGAACACAAATGAATTACAGAAGCTTGAGAAACAATTAGCAAAAGGTTTGAGCCGTGTTGTCAAAGCAAAGGATGAAATGGTCATAAAAGAGATCAATACGCTCAAGAGAAAGAGAATCCAGCTGATGGAAGAAAATCAGAGATTGAAACAGGTGAACAATGTTGCACAAGAACAAGGTCATCATTCATCTGAGTCAGCCAATAACGGGAGCACGTCTGATCCTCCACGTGAAGATGATAGTTCAGACACCTCTCTCAGATTGGGATCTTCGTCAGTTTAG 462 0.3961 MCFPFYSVQQVIEKHDQHSEIERLYHSSVLYEKETFSMLNKEEAHKTQELRQLKGEELEGLNTNELQKLEKQLAKGLSRVVKAKDEMVIKEINTLKRKRIQLMEENQRLKQVNNVAQEQGHHSSESANNGSTSDPPREDDSSDTSLRLGSSSV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1173 153 Pfam K-box region 32 111 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele33g1173 153 ProSiteProfiles K-box domain profile. 29 121 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele33g1173 153 MobiDBLite consensus disorder prediction 110 153 - -
Lele33g1173 153 MobiDBLite consensus disorder prediction 110 135 - -
Lele33g1173 153 Coils Coil 66 86 - -
Lele33g1173 153 Coils Coil 92 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1173 Lele-ChrLele33 22159602 22162826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1173 3 149 MADS-box Gene Family AT2G22540 36.872 1.03e-27 101