Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1168 ATGGTAGAAGGTGAATATTTTAAGCTAAACAAGGAACTGAGAGAGAAGACTCGAGAACTGAGGCAGCTCAATGGAGATGAACTTCAAGGATTGACTATAAAAGATCTAAAGAAGCTAGAAGATCTACTTAGCACATGCTTGCATCGTGTTTCAAAAGCCAAGGCTGAAGCATTTGAGCAGGAGATCAGTATTCTTAATAAAGAGGAAGCCAGACTGATGGAAGAAAACCAGAGACTAAATCAGGAAGTCAAATTCTTGGAAGTAAAGCAGAGATTAGAACAGGTTCAAAGGCTTGAGCAAGATCAAGAGAAGTCATTGGCTACCTCTCTCACAACGAGGAACGATGATTTGTAA 354 0.3983 MVEGEYFKLNKELREKTRELRQLNGDELQGLTIKDLKKLEDLLSTCLHRVSKAKAEAFEQEISILNKEEARLMEENQRLNQEVKFLEVKQRLEQVQRLEQDQEKSLATSLTTRNDDL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1168 117 Coils Coil 6 26 - -
Lele33g1168 117 MobiDBLite consensus disorder prediction 101 117 - -
Lele33g1168 117 Pfam K-box region 4 83 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele33g1168 117 Coils Coil 36 89 - -
Lele33g1168 117 ProSiteProfiles K-box domain profile. 1 91 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele33g1168 117 MobiDBLite consensus disorder prediction 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1168 Lele-ChrLele33 22061088 22067953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1168 5 82 MADS-box Gene Family AT2G22540 43.590 3.68e-13 61.6