Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1150 ATGGGCTATATGGCACCAGAGTACGGATCAGAAGGAATTGTTTCTACCAAAGGAGATGTGTATAGTTATGGCATCATGCTAATGGAAATGTTTACAAGGAAGAAGCCAACAGATGAAATGTTTGTTCAAGGATTAAGTTTGAAAGATTGGGTGAGAAAATCAACACCACATTCAATCATCAATATTATAGATGTCAATTTGATGCATAGAGAAAATCATAATACTGATAATATATTATCTCATATATCATCAGTTTTTGAGTTAGCATTAAATTGCTGCATTGACTTACCTGAGGCACGACTTACTATAACTGATGTTGTAGTATCATTGAAAAAAATCAAGGCTGTATTTATAGAAAATGCTAGGGATATTGCTAGGTGA 381 0.3333 MGYMAPEYGSEGIVSTKGDVYSYGIMLMEMFTRKKPTDEMFVQGLSLKDWVRKSTPHSIINIIDVNLMHRENHNTDNILSHISSVFELALNCCIDLPEARLTITDVVVSLKKIKAVFIENARDIAR 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1150 126 Pfam Protein kinase domain 2 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1150 126 SUPERFAMILY Protein kinase-like (PK-like) 2 116 IPR011009 -
Lele33g1150 126 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 113 - -
Lele33g1150 126 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1150 126 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1150 Lele-ChrLele33 21350633 21351213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1150 1 126 Receptor kinase-like Gene Family AT3G47570 38.095 2.58e-25 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele33g1150 Pkinase 1.3e-08 CL0016