Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1133 ATGATTGATGTGGCAATAGCTTTGGAGTATCTTCATCATGATTCTCCAATGCTAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTGTTGGATAAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTGCTAAGTTGTTTGGTGAAAGAGAATTGGAAATTTATACCAAAACTTTGGCTACAATTGGCTATATGGCACCAGAGTACGGATCGAAAGGAGTTGTTTCTGCCAAAGGAGATGTGTATAGTTATGGCATCATGCTGATGGAAATATTTACAAGGAAGAAGCCAACAGATGAGATATTTGTTCAAGGATTAAGTTTGAAAGATTGGGTTAGAAAATCAACACCACATTCAATCATCAATATTATAGATGCCAATTTGCTCCATAGGGAAAATCATAATACTGATAATATATTATCTCATATATCATCAGTTTTTGAGTTAGCATTAAATTGCTGTATTGACTTACCCGATGCACGACTTACTATAACTGATGTTGTAGTATCATTGAAAAAAATTAAAGCTTTGTTTATAGAAAATGCTAGGGATAATATTAGATGA 567 0.3333 MIDVAIALEYLHHDSPMLVVHCDVKPSNVLLDKDMVAHLSDFGIAKLFGERELEIYTKTLATIGYMAPEYGSKGVVSAKGDVYSYGIMLMEIFTRKKPTDEIFVQGLSLKDWVRKSTPHSIINIIDANLLHRENHNTDNILSHISSVFELALNCCIDLPDARLTITDVVVSLKKIKALFIENARDNIR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1133 188 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 175 - -
Lele33g1133 188 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1 185 - -
Lele33g1133 188 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1133 188 SUPERFAMILY Protein kinase-like (PK-like) 1 172 IPR011009 -
Lele33g1133 188 Coils Coil 184 188 - -
Lele33g1133 188 Pfam Protein kinase domain 3 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1133 188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Lele33g1133 188 SMART serkin_6 2 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1133 188 Gene3D Transferase(Phosphotransferase) domain 1 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1133 Lele-ChrLele33 20679963 20680746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1133 2 188 Receptor kinase-like Gene Family AT3G47570 41.451 7.57e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele33g1133 Pkinase 4.4e-26 CL0016