Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1110 ATGCTATGCTCCTTGGACGAGATGAGGCCGTGGCGTGCTGCTACGTGGAGGTCTGCAGCTGGATATGGTGAATGGAAGTCTCACGGCATCCTGGGAAACATCCCAACAACTATGGGCAGCTTGCAAACATTGCAAAAACTATCTTTGTCTCATAACAAATTGCAAGGGCCCATTCCTAAATCATTTAGTGGCATGATAGATATTGATTCCTTGGATCTCTCCCAAAATTATTTATCTAGTGGGATTCCAAAATCCTTAGAGTTACTTATCCATATGAAGCATCTCAATCTTTCGTACAATTTATTGCAAGGAGAAATTCCAAATAATGGGCCTTTTCAGAATTTTACATATGAATCTTTTATAAGGAATGGAGATCTTTGTGGGAAGTCTAAACTAAAAGTCCATCCATGCAAAAAAGGAAAGAAGCACATCTCAACCAAAATGGTGCTTGTGATCAAATACTTAGTGCCTATCATTTCTGCAATCATTTTGGTTGCTTCATGCCTAATGTTTCTAAAGTTTAAAAAGGATCATGTTAGTCATGAGATGACTAATGGAGACTTCTTAAATTTGGACAAGCCAATGAAGATATCCTATTATGATCTTTTGCAAGCAACAAATAGATTTGATCAGAGTAATTTTCTTGGCAAGGGAAGTTTCAGATCAGTATACAAAGGAATTCTTTCAAGTGGAAAGATAGTTGCTGTCAAAGTATTTAACTTAAACTTGGAAGTAGCATCGAGGAGTTTCGATGTTGAATGTGCTACCATATGCGAGCTTCGTCATCGGAATCTCATTAAAATCATTAGTAGTTGCTCCAATGATGATTTTAAATCCCTTATAATGGAATTCATGTCAAATGGGAGTCTTGATAGATGGTTGTACTCCCATAACTATTGTTTAGATATAGTGCAAAGATTGAACATAATGATTGACGTGGCATCAGCATTGGAGTATCTTCATCATAGTTCTTTTACACCAGTGGTCCATTGTGATGTAAAGCCAAGCAACGTTTTATTGGATGAAAATATGGTGGCCCATTTGAGTGACTTTGGAATCTCCAAATTGTTAAGTGAGAGTCAATCAGAAATTTATACCAAAACTGTGGCCACAATTGTTTTTTGCCGAGCCGACTTAGCTTTTCTGTGCATGCTCTGTGACAACAAGATTCATTCCGCCAATAAGCTTGCTTCCTGGCATGAGTGTGTGTGGATGTGCAAGGTTTGCGAGCTAGCCCCTGCCGATGGTAGATGCAAGGCTGATGCTGTCTCGGTCTGTGTCAAGTGCGATTTTGACATCCACTCCACTAATCTACTGGCTTGCCATCACGAGCATGTGCCTATGGAGGTCTTCTTTGATTCCACTAACTTTGTGGCGAAAGCGTCTGCTGCTGCCACTAACTTGCTGGTGACTTCACCCACGATGACGATGGCTTCACTGGGGAATTTTGAGACTTAA 1458 0.3999 MLCSLDEMRPWRAATWRSAAGYGEWKSHGILGNIPTTMGSLQTLQKLSLSHNKLQGPIPKSFSGMIDIDSLDLSQNYLSSGIPKSLELLIHMKHLNLSYNLLQGEIPNNGPFQNFTYESFIRNGDLCGKSKLKVHPCKKGKKHISTKMVLVIKYLVPIISAIILVASCLMFLKFKKDHVSHEMTNGDFLNLDKPMKISYYDLLQATNRFDQSNFLGKGSFRSVYKGILSSGKIVAVKVFNLNLEVASRSFDVECATICELRHRNLIKIISSCSNDDFKSLIMEFMSNGSLDRWLYSHNYCLDIVQRLNIMIDVASALEYLHHSSFTPVVHCDVKPSNVLLDENMVAHLSDFGISKLLSESQSEIYTKTVATIVFCRADLAFLCMLCDNKIHSANKLASWHECVWMCKVCELAPADGRCKADAVSVCVKCDFDIHSTNLLACHHEHVPMEVFFDSTNFVAKASAAATNLLVTSPTMTMASLGNFET 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1110 485 FunFam Os07g0541700 protein 285 372 - -
Lele33g1110 485 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 117 - -
Lele33g1110 485 Gene3D Ribonuclease Inhibitor 21 145 IPR032675 -
Lele33g1110 485 ProSiteProfiles Protein kinase domain profile. 209 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1110 485 Gene3D Transferase(Phosphotransferase) domain 1 285 380 - -
Lele33g1110 485 Coils Coil 485 485 - -
Lele33g1110 485 Pfam Leucine rich repeat 43 102 IPR001611 GO:0005515
Lele33g1110 485 Pfam Protein kinase domain 211 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1110 485 SMART bboxneu5 401 448 IPR000315 GO:0008270
Lele33g1110 485 SUPERFAMILY Protein kinase-like (PK-like) 190 374 IPR011009 -
Lele33g1110 485 FunFam Serine-threonine protein kinase plant-type 190 284 - -
Lele33g1110 485 SMART serkin_6 209 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1110 485 PANTHER OS04G0122200 PROTEIN 31 372 - -
Lele33g1110 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Lele33g1110 485 SUPERFAMILY L domain-like 30 123 - -
Lele33g1110 485 CDD Bbox1_BBX-like 367 405 - -
Lele33g1110 485 Gene3D Phosphorylase Kinase; domain 1 171 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1110 Lele-ChrLele33 19544973 19548371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1110 24 371 Receptor kinase-like Gene Family AT3G47570 36.735 1.36e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele33g1110 Pkinase 4.1e-32 CL0016