Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1048 ATGGGGATTTCACCCATCATCAGAGAGTTACCTGATCAACTGGGAATAACAATGGAGGATCCAGGTTATCTTCATGATGAGTGGCATCATCATCATCACTTGAACGCTAATTATGAGGATACAACCTCAATACCCATAGCTGCTGCAGCTTTTGGAGAGATATTATTACAGCAACACTCTTCATTCTGTAATAATAATATGATGAACAACCCAGACTTCAATCCCAAAATCAGTAGTTGCATGCAAACTGCTTCCTTTAATAATGAAGAAAGACCCACAAAGCAGATCAAAACCTGCAGCAACATTACTACTACTTCATGTTGGAGTCCCAATAATAATAATAATAATAATAATAATAATAATACTCATGAGAGTCCAGAGCATCACCAGACATCATCAGACCAGCTTCTGCAATTTGCTTCTTCGTGTCCACCCAACCTTGTTTCCTTTGTGAATCAGAACTACATAAATCAGATGGGATTAATGGGGAAGATCCCCAGTAATAATAAGAATGAGACAGTATTATTGTCTCCAAAAGATCATCATGTTTTGATGTGTTCTCAAGAATCCTTGGGGAATCCGAACTATGGGTTCATGAAGACAACGACAAGCCAATTAGATCAGGCCAGGAAGATTATTGGGACCATTAGTCCTAATAATAATAGAGTATCTCAACCTGTACAGGACCATATCATTGCTGAAAGGAAACGAAGAGAGAAGCTTAGCCAGAGGTTCATTGCTTTGTCTGCTCTTGTTCCTGGTCTTAAGAAGATGGACAAAGCTTCTGTGCTTGGAGATGCTATAAAGTACATGAAGCAACTGCAAGAGAGAGTGAGGGTTCTTGAGGAGGAACAGACAAAGGTGAAAACAGTGGAATCTGTGGTGATTGTGAAGAAATCTCAGTTTCTTCCTTCTGATATTGCGGCAGAAGCTTCTGACTCTTCTTCAGATTCTGGTGGAGGAGGAGGATCATCGTCCTTCGACGAAACAGTCCTCCCAGAAATTGAAGCAAGGTTCTGTGAAAGAAATGTGCTCATAAGAATTCACTGTGAGAAAATCAAAGGAGCTCTTGGAAAAGCAATGAGTGTGATTGAGGATCTCCATTTAACAGTCACCAATAGTAGTTCCTTGACTTTTGGGAGTGCTGCTCTTGATATCACAATTATTGCTCAGATGGATTCAGAATTTTGCATGACACTGGAGGATCTCGTGGGAAACCTAAGATCATCCTTTAAATCTTTCCTGTGA 1248 0.4006 MGISPIIRELPDQLGITMEDPGYLHDEWHHHHHLNANYEDTTSIPIAAAAFGEILLQQHSSFCNNNMMNNPDFNPKISSCMQTASFNNEERPTKQIKTCSNITTTSCWSPNNNNNNNNNNNTHESPEHHQTSSDQLLQFASSCPPNLVSFVNQNYINQMGLMGKIPSNNKNETVLLSPKDHHVLMCSQESLGNPNYGFMKTTTSQLDQARKIIGTISPNNNRVSQPVQDHIIAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYMKQLQERVRVLEEEQTKVKTVESVVIVKKSQFLPSDIAAEASDSSSDSGGGGGSSSFDETVLPEIEARFCERNVLIRIHCEKIKGALGKAMSVIEDLHLTVTNSSSLTFGSAALDITIIAQMDSEFCMTLEDLVGNLRSSFKSFL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1048 415 MobiDBLite consensus disorder prediction 308 327 - -
Lele33g1048 415 Pfam Helix-loop-helix DNA-binding domain 229 275 IPR011598 GO:0046983
Lele33g1048 415 SMART finulus 231 280 IPR011598 GO:0046983
Lele33g1048 415 Gene3D - 218 290 IPR036638 GO:0046983
Lele33g1048 415 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 225 274 IPR011598 GO:0046983
Lele33g1048 415 CDD bHLH_AtNAI1_like 228 300 - -
Lele33g1048 415 Coils Coil 264 291 - -
Lele33g1048 415 MobiDBLite consensus disorder prediction 308 325 - -
Lele33g1048 415 PANTHER BHLH TRANSCRIPTION FACTOR 64 411 - -
Lele33g1048 415 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 230 287 IPR036638 GO:0046983
Lele33g1048 415 MobiDBLite consensus disorder prediction 107 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1048 Lele-ChrLele33 17916076 17919512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1048 228 415 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 59.574 3.99e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele33g1048 HLH 3.7e-10 No_clan