Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1015 ATGACGTCTAAGCAGCGGAGCAACTTTGAAACAAAACGAAAACGACACCACTTGAGCCCTTTGCATCGATTGTGGCCAATGCCCAATGCTTTTGTCTGTCCGTACGAGAATGTGACGATTAGTGCTATTGACGTTCTTGATCATAGTCGAGTTAAAGAATTCTGCGCTCTCACTCCCCTGATCTATGTTGATTACTTAATTTTTCAGAATCTCTTGGCTTTAATAGTAGGGATTTGTTTAGGCTTTGTCTTTGGAGTGGGTGTGGCAATCGCATTTGTATGCTGCTTCTGGTGCCAAAATAAGCATACAAAGGAAAAGAGAAGCTCTGAGAAATCAGGAAACATTCCTCTTCGTATCAAGGTAGTCGATCCTGGTGTATCATTGTCAAGCTCAAATGTGGGGCAGGATTCGCCCGCATCATCTGACTGGAGTAACATGCCTCTTTGGTTGGAAGGACTAAAGAGGAAGGATGTTGGTTCTGCGTGCGGAATTCCAAAGTATTCTTACAAAGATATGCAGAAGGCAACTTCTGATTTCACAACCATCATAGGTCGTGGAGCATTTGGTTCAGTTTACAAAGCTCAGATGCTCACTGGTGAAACAGTTGCTGTTAAAGTTCTTGGTAATAATTCAAGACATGGAGAGAAGGAGTTTTTGACCGAGGTCTTGTTACTTGGAAGATTACACCACAAACGCCTTGTGGATTTGGTGGGATATACTGCAGAAAGAGGACAGCATATGCTCCTTTTTGCTTACATGAGTAATGGCAACCTCGCTTCTCACTTATATGGCAAAACTCAGGAGCCATTAAACTGGGATGCAAGATTTCAGATAGCACTAGATGTTGCGAGGGGAATGGAATATCTACATTACGGGGTACATAGTATACTTGCTTCTCCCCCTGTTGTGCACCGTGACATTAAATCTTCCAACATACTGCTGGACCAGTTTATGAGAGCCAAGGTAACGGACTTTGGGCTTTCTAGACCAGAGATGATTAAACGTCGTTCATCTAATGTCAAAGGAACTTTTGGCTATCTGGATCCAGAATACATGTCTACAAAAACTTTTACCAAGAAAAGTGATGTTTATAGTTTTGGTGTACTACTTTTTGAATTGATTACTGGCAGGAATCCACAGCAGGGCCTGATGGAATATGTGAAACTAGCTGCCATGGAAGCCGAGAGTAAGGTTGGATGGGAAGAAATTGTGGATTCACAACTTAATGGAAAATATGACGTGCATAGGCTTAATGATATGGCTGCTCTTGCTTTAAAATGTGTCAATGAAGCATCCAGAGATCGACCTTCCATGAGAGACATTGTTGGATCATTATCTCAGCTCTGTAAGAAGAAGCATTGTGGAAATGATACTGTGAAGTCTCTTTCTGCAGTAAGTGATAATCCATTGAATTGGTTTAAGTCTTCGTCCACAGAGCGCTCAAATGTGATGCACTGA 1458 0.4198 MTSKQRSNFETKRKRHHLSPLHRLWPMPNAFVCPYENVTISAIDVLDHSRVKEFCALTPLIYVDYLIFQNLLALIVGICLGFVFGVGVAIAFVCCFWCQNKHTKEKRSSEKSGNIPLRIKVVDPGVSLSSSNVGQDSPASSDWSNMPLWLEGLKRKDVGSACGIPKYSYKDMQKATSDFTTIIGRGAFGSVYKAQMLTGETVAVKVLGNNSRHGEKEFLTEVLLLGRLHHKRLVDLVGYTAERGQHMLLFAYMSNGNLASHLYGKTQEPLNWDARFQIALDVARGMEYLHYGVHSILASPPVVHRDIKSSNILLDQFMRAKVTDFGLSRPEMIKRRSSNVKGTFGYLDPEYMSTKTFTKKSDVYSFGVLLFELITGRNPQQGLMEYVKLAAMEAESKVGWEEIVDSQLNGKYDVHRLNDMAALALKCVNEASRDRPSMRDIVGSLSQLCKKKHCGNDTVKSLSAVSDNPLNWFKSSSTERSNVMH 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1015 485 ProSitePatterns Protein kinases ATP-binding region signature. 183 205 IPR017441 GO:0005524
Lele33g1015 485 ProSiteProfiles Protein kinase domain profile. 177 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1015 485 Pfam Protein tyrosine and serine/threonine kinase 180 444 IPR001245 GO:0004672|GO:0006468
Lele33g1015 485 SMART serkin_6 177 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1015 485 Gene3D Transferase(Phosphotransferase) domain 1 253 467 - -
Lele33g1015 485 SUPERFAMILY Protein kinase-like (PK-like) 163 445 IPR011009 -
Lele33g1015 485 Gene3D Phosphorylase Kinase; domain 1 161 252 - -
Lele33g1015 485 PANTHER OS01G0750732 PROTEIN 75 458 - -
Lele33g1015 485 FunFam calcium/calmodulin-regulated receptor-like kinase 1 253 467 - -
Lele33g1015 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1015 Lele-ChrLele33 17349816 17355130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1015 159 455 Receptor kinase-like Gene Family AT3G19300 39.735 2.37e-71 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lele33g1015 PK_Tyr_Ser-Thr 5.7e-50 CL0016