Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g1012 ATGGGAGCTTGCTTCTGTGACCTCGAAGTAGACGTCAACGGCGAAGCAACTTTCATGGTGAACAAGAATGTTCTTTCTTCCTTCTCCAGTAAATGTAGCAACTTATTTGGTAATTTCATGGGTAAAAATGAGGTCCTTAAAGTTATCTTCAATGACTTTCCAGGAGGAGCAAATGGTTTTGAGCTCATTCTACGATTTTGCTACAGTAGCACCAAAATGGTGATTACGCCTTCCAACATAGTCCTGCTTTATTGTGCTGCTCAATTCATGGAGATGCCAAATGTGATATCCCAAATTGAAAAATTCCTTGAAGACAGGATTCATTTATGGACTTGGTTCGAGCTCGTTGAAGCATTAAAACAGTGCCAAGAGTACTCGATTTCTTCAAAAAGTTACTTCACAATTCTGGACAGAATCATAGATCACCTTATAGAGAGGCTTGTGATTTTTCCAAACATTCCAAGCCCATATACATGTTCTTCTAATAGATCTAGTTTCCAGTTTTCTTGTGAAACTAGCAGTAACAATAGCTGGAGAAATAACTGCTCTGGTCCTTCTTGGTGGTTTGAACATCTTCTGTTCTTGAAGGTTGATTTGATTGAAAAAATAGTAAGGACAATGATTTCTCATGATTTTGATCATGCTGTTCTCTCTAAGTTTCTATTTTATTACCACAAATTAAGTTGTACTGGTGCTGCAAAATCAAAGAAGAAGAATACTGAGACAACAGAAGTTGTGATCAATCTGCTTTCATTACTTGATAAGAGGTCTCTTTCTTTCAAGGACTTGTTCGGTCTCTATCGAACTGGTTTCAGATTGAAAATAATAAGTTCATGCTGTAGAAGCAAAATTGGAAGTCTTATAGGTCCCCTGCTGGATCAAGGAACAGTAGATTATCTGCTTCTTCCTACTCAAAAAGGGATGGATCATGCATTTGATGTTGTTTTCGTGCTGAGGCTTGCACAAGTATTTGTCGATGAAGGCGATTTTGGGATATCTTTGGGAAAACTTAAGAGAGTGGCGAAAATGGTGGACTCATTTCTGATAGAAGTTGCTCCAGATCGCCATCTCCAACCTTCTGAATTTGCAGAATTAATTACTGTTCTCCCAGATGCTGCAAGACAATCTCATGATCAGTTATACCTAGCGATGGACATTTATCTGAAGGTTCACAAAGGACTATCTGAAAAGGAAAAGATGAGTATTTGCTGTGCACTGAATCATGAGAAGTTGTCAGCTGAACTTTTGAGGAATCTTACAAGGAACTTGGTATTTCCCGCAGAAGCAAAACCAAGAAGTCATGCTCAAACACAGAGCAGAATAAAACACTTACTCCAAGAGAATGATCATCTGAAATACTTTCTTGATTCAGTGTTTCGTAAAAGCTTTAAGACACCAGATGCTGAAAACAGAACTACTGCAGATGATGATGAAGAGCTGAAACCTAAGGAGGATTTGCAAGTAATGAAGAGTGTGATGAAATCTGGATCTCAGATCATGAACAATGCTAGATTCTTGCCAAAACTCTTCAAAACCATAGAAGAGAAATCCAAGTCAGGTCAGATCTTCCAAAGTGAAGAGAAAGACAGAGATGAAGATATGAACTCCATTTTTATGGAACCTATGTTTGTGTTGGTAATGGATCCTCTTGGTACTGTCGTCGACAAATTTAAAGTTTTTACTAAATCAAGCCAAGAATTCTTCGCCGGCCTCTTCCCTGGCCATGGCCAGCGCCGAAACTCTTCTTCTCGTAATCCGGCATGTTTCCCACTTCAACCATCATGTCTGATTGAAATCCTAAAACGTTTACAGAGAGAAGCTTTTTCGGATCTCATGAAACTCAGGGAAAGACAAGACAAGGTTGAAAGAATACTTTCCTTCTATAAACCCTCCTCTGCAGGAGGTCCATTTCAAGAATCTACCACCCATGTAAGGGGACAAGTGGATCTTTTGGGAGCTTTGTTGATGATGAATAATACTAATGAGGAGAGTTTAGATGTAATGGATAGAGCTGGAATTAGGACTGGAGTTGATTCGAGGTTAATTTTTGAAACAAACATCAGGGATAAGGATACTCTTATTGCAGAGTTTGTGGCCAGTCAGAAAGCTATGGAGCATGACACTGATGTCCTGGGCAGCCCGCTTTCTCTGGCGAAACTCAGTTATATGGCAAAAGTTAATGATTGGTTATCTGTGATGGCTATCCCTATGGGAGCTCAATGCAAAGATGTTGCAATTACTTCGAAATCTTTCCACCAGCACGGAAAGGGCCTTACAGACGTTTCCTCCGTTGGACCGCCGCTACTGAATCTGCAGAATGGTAGCGCCATCAGCATGATGGTGAGAAAATCGAATATTGTTGCTTCATTGGCTCAGTTTGTATCTGGACTACGAATGCCATTAGGTTCTAATGCAAGTGAGAATTGGTCCAGCACTTTCTCTGAACTTTCATGTCACTTACCTAGAGGAACGAAGCTCTCTGTTATGGGTCTCTACCAAATTCCTCTTTCATCAACTGAACTATCAAAACTTGGACCTCTCACAATTCCAATACTCACATCACAAGAAGCAGAACCAGAAGCATCCGAAACTGTCTATGGATCATTTCCATGGTCAGAAATAAAGACAAAGTTCTCCACTCAATCGATCGCCCTTACGTTGGAATCGGAACTTGATGATATCACAAAGATTGGAGGTTGGGTTGAGATGAACAGATCAAATGTTCAGTGGGGTGTGAGTATGGCTGATGTCTCAGGAGATCCACTTGGCTGGGGAATGAGCCTCAATGGGATGATTGGAGATTCAGCATCTGGGGATCTCTTTCAGGTTGAATCCTATCTGAAGTTTAACTTTGGCAAGAAATTCTGCTTGAAGCCAGGTTTTGCTTATGTGACTGCTGGGGATTCTAAAATAGCTGGTTTGATTCTACGCTCTAATACCGATGAAACTCATTTGAGGTCTGAGTCTAAAGACATGAGGCTTCCTTCTTCTCACATTCTGATTCTTTTGTCTGTGGTTTCTGCAACACTCCATTATTGTTTCTGCCAACAAGAATACCTTAACAACACAGTCTATGACTGCAATTTCAACCTAACAAGAAAAGCAGGATATGTCTGCAATGGCCTCCATAAGTCATCATGCCCTTCCTTCGTAAGTTTCAGATCAAGATCTCCTTATGACACACCTCTAAGCATTGCCACTCTTCTTGGGTCTGAAGCATCTTCCATAGCCTCCATCAACAACATCTCAAGCAACGACAACAGTAGCATTCCTTCAAATCGAACCGTGATTGTTCCGGCCTATTGTTCATGTTCAGGCAACATCTACCAGCATGCGGCTTCTTATGAGGTGAAAAAAGGAGACTACTACTTCAACTTAGCCAACAAGACATATCAAGGCCTTGTGAATTGCCAGATGTTAGTACGTCAGAACTATTATCTTCCTGAAAATCTCAGTATTGGTGCTCAAGTTTCAGTTCCAGTTCTGTGTGCTTGTCCGACGGAAAAACAGATCTCAGATGGAGTCTCTGCTTTGCTGGTTCATATCCTTGATTATGGGGATTCACTGCAATCAGTTGCAGATTCTTATGGGGTGGATCAACAAAGTTTGCTAACTGCTAATGATTTGCCTTCTTCAAATGCCACTATCTCTGCTATGACCCCTATTTTGGTTCCTCTCAAAGCCTCTTCTTGTGAACTCAATCAACATTTTTTCTATTGCACATGTTCATTCTCTCAGCTTTACTTTCCAAATTCAAGTTTCAATAATCTCAATTGTGGTCATCTTCAACCTGATGGGCATGGCTTTCCTGTTAAATTGGTTGCTTCCATAGGTGTTGGTACTGGTGCTGTTTTGTTGTGCTTATTTCTTTTGGGTTACAAGTTACATCAATGCATAAAACAAAAACAAGAAAGAGTTTATAAGGAAAAAATGTTCAGGCAAAATGGTGGCCTTTTGCTGCAAGAAAAGATGTCAAGTTATGGAAATAGAGACAATGCAAAGCTTTTTACAGCACAAGAACTGGAAAGAGCGACAGATAACTACAATCAAAGCAGGTTTCTTGGTCAAGGTGGGTTTGGAACTGTTTATAAAGGGATGTTACTAGATGGTAGCATTGTTGCAGTTAAGAAGTCAAAAGATATTGTGAGAAACCAGATTGAGACTTTCATTAATGAAGTGGTGATTTTATCCCAAATAAACCATAGGAACATTGTCAAACTCCTAGGTTGTTGTCTAGAGACTGAATCCCCATTACTAGTTTATGAATTTATTCCCAATGGAACACTTTCTCACCACATCCATAACCATGAACTTGAAGCAAATCTTTCATGGGATGTTCGTCTTAGAATTGCATGTGAGGTTTCAGGAGCAGTGGCCTATATGCATTCTGCAGCTTCCATTCCCATCTTCCATAGAGACATCAAAACCTCAAACATACTCCTAGATCATAACTACAATGCAAAAGTGTCTGATTTTGGGACTTCCAGATCGGTCCCAAATGATAGAACTCACTTAACCACAGTGGTACAAGGCACTTTTGGGTACATTGACCCTGAATACTTCCAATCTAGTCAATTCACAGATAAAAGTGATGTATATAGTTTTGGGGTGGTACTTGTAGAGCTCATTACTGGAAGGAAACCAATTACCTTCTCAGAAGAACATCAGGGTCAGAACCTTGTTGCAGAATTCATTTCTTTGATGAAGAAGGACCAAGCTTATGAGATTTTAGATGCTAGAGTTGTTCGTGAAGGAAGGGAAGACGATCTTCTTGGGATTGCATATCTTGCATTGAGATGCTTGAGACTCAATGGGAAGAAGAGACCCACAATGAGAGAGGTTTCAGCAGAGCTAGAAGCACTGAGAAAGACGGAAAATGCCTTAGAGATCACTGAATGTTGTTCTTATGATGAGTTTCCAAATGATAAGGATACAACCACCTCTTCTTTTGAAACAATCCAAGAATCCACAGAAGAAAGCATGTCATTATTTCTCCAAATGGATTCCACATCCATCTCAAGGTGA 5025 0.4014 MGACFCDLEVDVNGEATFMVNKNVLSSFSSKCSNLFGNFMGKNEVLKVIFNDFPGGANGFELILRFCYSSTKMVITPSNIVLLYCAAQFMEMPNVISQIEKFLEDRIHLWTWFELVEALKQCQEYSISSKSYFTILDRIIDHLIERLVIFPNIPSPYTCSSNRSSFQFSCETSSNNSWRNNCSGPSWWFEHLLFLKVDLIEKIVRTMISHDFDHAVLSKFLFYYHKLSCTGAAKSKKKNTETTEVVINLLSLLDKRSLSFKDLFGLYRTGFRLKIISSCCRSKIGSLIGPLLDQGTVDYLLLPTQKGMDHAFDVVFVLRLAQVFVDEGDFGISLGKLKRVAKMVDSFLIEVAPDRHLQPSEFAELITVLPDAARQSHDQLYLAMDIYLKVHKGLSEKEKMSICCALNHEKLSAELLRNLTRNLVFPAEAKPRSHAQTQSRIKHLLQENDHLKYFLDSVFRKSFKTPDAENRTTADDDEELKPKEDLQVMKSVMKSGSQIMNNARFLPKLFKTIEEKSKSGQIFQSEEKDRDEDMNSIFMEPMFVLVMDPLGTVVDKFKVFTKSSQEFFAGLFPGHGQRRNSSSRNPACFPLQPSCLIEILKRLQREAFSDLMKLRERQDKVERILSFYKPSSAGGPFQESTTHVRGQVDLLGALLMMNNTNEESLDVMDRAGIRTGVDSRLIFETNIRDKDTLIAEFVASQKAMEHDTDVLGSPLSLAKLSYMAKVNDWLSVMAIPMGAQCKDVAITSKSFHQHGKGLTDVSSVGPPLLNLQNGSAISMMVRKSNIVASLAQFVSGLRMPLGSNASENWSSTFSELSCHLPRGTKLSVMGLYQIPLSSTELSKLGPLTIPILTSQEAEPEASETVYGSFPWSEIKTKFSTQSIALTLESELDDITKIGGWVEMNRSNVQWGVSMADVSGDPLGWGMSLNGMIGDSASGDLFQVESYLKFNFGKKFCLKPGFAYVTAGDSKIAGLILRSNTDETHLRSESKDMRLPSSHILILLSVVSATLHYCFCQQEYLNNTVYDCNFNLTRKAGYVCNGLHKSSCPSFVSFRSRSPYDTPLSIATLLGSEASSIASINNISSNDNSSIPSNRTVIVPAYCSCSGNIYQHAASYEVKKGDYYFNLANKTYQGLVNCQMLVRQNYYLPENLSIGAQVSVPVLCACPTEKQISDGVSALLVHILDYGDSLQSVADSYGVDQQSLLTANDLPSSNATISAMTPILVPLKASSCELNQHFFYCTCSFSQLYFPNSSFNNLNCGHLQPDGHGFPVKLVASIGVGTGAVLLCLFLLGYKLHQCIKQKQERVYKEKMFRQNGGLLLQEKMSSYGNRDNAKLFTAQELERATDNYNQSRFLGQGGFGTVYKGMLLDGSIVAVKKSKDIVRNQIETFINEVVILSQINHRNIVKLLGCCLETESPLLVYEFIPNGTLSHHIHNHELEANLSWDVRLRIACEVSGAVAYMHSAASIPIFHRDIKTSNILLDHNYNAKVSDFGTSRSVPNDRTHLTTVVQGTFGYIDPEYFQSSQFTDKSDVYSFGVVLVELITGRKPITFSEEHQGQNLVAEFISLMKKDQAYEILDARVVREGREDDLLGIAYLALRCLRLNGKKRPTMREVSAELEALRKTENALEITECCSYDEFPNDKDTTTSSFETIQESTEESMSLFLQMDSTSISR 1674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g1012 1674 Pfam LysM domain 1186 1217 IPR018392 -
Lele33g1012 1674 CDD STKc_IRAK 1354 1621 - -
Lele33g1012 1674 SUPERFAMILY Protein kinase-like (PK-like) 1329 1618 IPR011009 -
Lele33g1012 1674 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1090 1625 IPR045274 GO:0007166
Lele33g1012 1674 Coils Coil 1611 1631 - -
Lele33g1012 1674 ProSitePatterns Protein kinases ATP-binding region signature. 1354 1377 IPR017441 GO:0005524
Lele33g1012 1674 ProSiteProfiles BTB domain profile. 6 76 IPR000210 GO:0005515
Lele33g1012 1674 ProSiteProfiles Protein kinase domain profile. 1348 1621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1012 1674 SMART BTB_4 6 107 IPR000210 GO:0005515
Lele33g1012 1674 FunFam Wall-associated receptor kinase 2 1318 1423 - -
Lele33g1012 1674 Gene3D Phosphorylase Kinase; domain 1 1315 1423 - -
Lele33g1012 1674 Pfam BTB/POZ domain 5 105 IPR000210 GO:0005515
Lele33g1012 1674 Gene3D Transferase(Phosphotransferase) domain 1 1424 1639 - -
Lele33g1012 1674 Gene3D Potassium Channel Kv1.1; Chain A 2 140 IPR011333 -
Lele33g1012 1674 FunFam Wall-associated receptor kinase 2 1424 1639 - -
Lele33g1012 1674 ProSiteProfiles NPH3 domain profile. 186 440 IPR027356 -
Lele33g1012 1674 ProSiteProfiles LysM domain profile. 1179 1224 IPR018392 -
Lele33g1012 1674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1469 1481 IPR008271 GO:0004672|GO:0006468
Lele33g1012 1674 Pfam Protein kinase domain 1348 1615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1012 1674 SUPERFAMILY POZ domain 4 105 IPR011333 -
Lele33g1012 1674 SMART serkin_6 1348 1621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g1012 1674 Pfam NPH3 family 187 414 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g1012 Lele-ChrLele33 17292389 17304816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g1012 1278 1624 Receptor kinase-like Gene Family AT1G16130 56.447 8.09e-126 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele33g1012 Pkinase 1.2e-48 CL0016