Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0960 ATGGACCATAGAGTAATTTTAGTGTACCTTAAAGTTGTGAGCGTAGGATCAGGATCCAGGAACCTTCACGTAGATCTTGTTCTCAAAGCACAGTACAAAATAAGATCTTTTGCGGGAAAATCTGGGGGACCTTTCACCACCAGAAGAGAAACCAGTCTTCAATGTAGACCAGCCCATCAAAACTGGTCTCACATCGCTTCACATCAATATGGTTCTCACACTGATGTAATATTACTTATCCTTACAATAACCTCGTTAGCCTTCAATATACGAACAGTCCCTTGCAGAGAACTTAACACCATGACGGTGTCTTCTGGTAAAGAGCCCGTTCTGATCACTACTCTTTTATTCCTAATTCTCTTCCTTCTTCATCATGCATCAAGCCACTCTCTTGATAGAATAACCCCAAGCCAAGCCCTCAGAGACGGCGACGTTTTGCTCTCCGACAAAGCAACCTTCGCACTCGGTTTCTTCAGTCCAACCACGAATAGTTCCAGAAATCGCTATGTCGGAATCTGGTACAACAAAGTTTCGACACAAACCATCGTTTGGGTTGCTAACAGAGACAATCCTCTTAATGATACTTCTGGGGTTCTCTCCATCAACATCCGCGGAAACGTCGTCGTTTCTCTCAACAACAACACAAGGACTAGCCTCAACGCGGTTTGGTCTTCCAATGGATCTTTCTCATCATCATCTTCCATTAATAATACCTTCGCTAAGCTTCTAGACACAGGTAACTTGGTTTTGATGGTGGAAGATGGAGGAAGACAGAGAATTGTATGGCAGAGTTTTGATTATCCTTGTGACACCATGATGCCGTTTATGAAACTCGGGTTAGACCGGAAAACCGGTTTGAACCGCTTCCTCACGTCATGGAAATCCACCGATGACCCAGGATTCGGGAACGTGAGCTATAGAATCGACCCAATGGGCTATCCTCAGTTGTTCATGTACAGAAACGGGAATCCACTCTGGCGGGTCGGATCTTGGACGGGTCAAAGATGGAGCGGTGTACCCGAGATGACACCCAACTTCATCTTCAGCGTCGTCTTTGTCAACAACGCTACAGAAGTTACCATAATGTATGGTGTGAAGGACCCTTCCGTAGATACCAGAATGATTCTTGAAAACTCCGGCCACGTGAGACGAACGACATGGCAGCCTCAAGAACACAGATGGTTCGAGATCTGGAATGGTCCGAAAGAGGACTGTGACGCCTACCGACGGTGTGGGTCAAATAGTAACTGTGACCCGTATAACACAGAGAAGTTTGAGTGTGTGTGTTTGCCCGGATTCGAACCCAAGAACCCGAGAGAATGGTACCTCAGAGACGGGTCAGATGGTTGCGTGAGGAAGAAGAATGTGTCAACGTGCAGAAGCCGAGAGGGGTTCGTGAAGGTGGCGCGTGTGAAGGTGCCAGATACGTCGAAAGCGCGTGTGGATTTGAGAACGAGCTTGAGCCTGAAACAGTGCAAGGAGAAGTGTCTGGGGGATTGTTCCTGTGCGGCGTATACGAGTGCGAATGAGAGCTCACAAACAGGTTGTCTGACGTGGCACGATGACATGGAAGATATTAGGATGTATAGCAGTGTGGGACAGGATCTCTATGTTCGGGTGGATGCACTTGAATTAGCGAAGCACCGCAAAAAGCCCTTTGGTTCTCTTGGCATAAAGGGGATGATTTCACTTTTAGTGGTTTCCATATTACTAGTAATGTTTCTGGTGATCTCTTTCATATATTGTTTTATGAAGAACAAGAAACAAGCAAGAAGAAGTCATAGCACAAATTTATTTGACTTCAACTTTGAGAACTCCCCCAATATGGATGACTTTGACGGTGGCAAAAATTCAGATTTACCATTGTTTGATCTTATTGACATAGCTGCAGCAACAGATAACTTCTCTGACACTAACAAGCTTGGACAAGGCGGTTTTGGTTCAGTTTATAAGGGTTTGCTCAGTAATGGAATGGCAATAGCGGTGAAGAGACTATCAAAGAACTCAGGTCAAGGCATTGAAGAGTTCAAAAATGAGGTTGTTTTAATTGCAAAGCTACAACATAGAAATCTTGTGAGAATCTTGGGTTGTTGCATACAAGGAGAAGAGAAGATGTTGATCTATGAGTATTTGCCAAATAAAAGTTTGGACTTTTTCATATTTGATCAAGAAAGGAAGTTACAATTGAGCTGGAGCAAGCGGTTTGATATCATATGTGGGGTTGCAAGGGGAATGCTATACCTTCATCAAGATTCAAGATTAAGAATCATTCATAGAGACTTGAAGGCCAATAATGTCCTGTTGGACTCTGCATTGAATCCAAAAATCGCAGATTTTGGTATGGCTAGAATATTTGGTGGGGATGAAATTGAAGCAAACACAAAACGCATTGTTGGAACCTATGGTTATATGTCACCAGAATATGCAATGAAAGGATACTTCTCAATAAAGTCTGATGTTTATAGTTTTGGAGTTTTGCTTCTGGAGATTGTTACTGGCAAAAAGAATAGCGGTCATTATGAAGAAATTACCTCAACTTTGGTCGAACACATTTGGGATTTATGGAAAGAAGGTAGAACTATGGAGATTGTCGATCCATCATTAGTAGTAGATGAGACATGCCTTAATGACCTTCTAAAATGCATTCAAATTGGGCTTCTATGTGTACAAGACTATGCAACAGACAGACCAACTATGTCTTCAGTGGTTTCCATGTTGGGAAGTGACTCCACTCTTCCTTCTCCTAAACAACCAGCATTTATTTTCAAAAGAAATTATACTGGTGACAGTTCAAATCCATCAACCAGTGAAGGAGTTAATTCAGTTAATGAGATGAGTACTACTGTGGTAGAAGCTCGCTAA 2862 0.4294 MDHRVILVYLKVVSVGSGSRNLHVDLVLKAQYKIRSFAGKSGGPFTTRRETSLQCRPAHQNWSHIASHQYGSHTDVILLILTITSLAFNIRTVPCRELNTMTVSSGKEPVLITTLLFLILFLLHHASSHSLDRITPSQALRDGDVLLSDKATFALGFFSPTTNSSRNRYVGIWYNKVSTQTIVWVANRDNPLNDTSGVLSINIRGNVVVSLNNNTRTSLNAVWSSNGSFSSSSSINNTFAKLLDTGNLVLMVEDGGRQRIVWQSFDYPCDTMMPFMKLGLDRKTGLNRFLTSWKSTDDPGFGNVSYRIDPMGYPQLFMYRNGNPLWRVGSWTGQRWSGVPEMTPNFIFSVVFVNNATEVTIMYGVKDPSVDTRMILENSGHVRRTTWQPQEHRWFEIWNGPKEDCDAYRRCGSNSNCDPYNTEKFECVCLPGFEPKNPREWYLRDGSDGCVRKKNVSTCRSREGFVKVARVKVPDTSKARVDLRTSLSLKQCKEKCLGDCSCAAYTSANESSQTGCLTWHDDMEDIRMYSSVGQDLYVRVDALELAKHRKKPFGSLGIKGMISLLVVSILLVMFLVISFIYCFMKNKKQARRSHSTNLFDFNFENSPNMDDFDGGKNSDLPLFDLIDIAAATDNFSDTNKLGQGGFGSVYKGLLSNGMAIAVKRLSKNSGQGIEEFKNEVVLIAKLQHRNLVRILGCCIQGEEKMLIYEYLPNKSLDFFIFDQERKLQLSWSKRFDIICGVARGMLYLHQDSRLRIIHRDLKANNVLLDSALNPKIADFGMARIFGGDEIEANTKRIVGTYGYMSPEYAMKGYFSIKSDVYSFGVLLLEIVTGKKNSGHYEEITSTLVEHIWDLWKEGRTMEIVDPSLVVDETCLNDLLKCIQIGLLCVQDYATDRPTMSSVVSMLGSDSTLPSPKQPAFIFKRNYTGDSSNPSTSEGVNSVNEMSTTVVEAR 953
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0960 953 Pfam D-mannose binding lectin 181 294 IPR001480 -
Lele33g0960 953 CDD PAN_AP_plant 460 540 - -
Lele33g0960 953 SMART blect_4 137 268 IPR001480 -
Lele33g0960 953 Gene3D Phosphorylase Kinase; domain 1 607 710 - -
Lele33g0960 953 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 116 897 - -
Lele33g0960 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 756 768 IPR008271 GO:0004672|GO:0006468
Lele33g0960 953 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 126 265 - -
Lele33g0960 953 Gene3D - 127 265 IPR036426 -
Lele33g0960 953 Pfam Protein tyrosine and serine/threonine kinase 638 906 IPR001245 GO:0004672|GO:0006468
Lele33g0960 953 ProSitePatterns Protein kinases ATP-binding region signature. 641 663 IPR017441 GO:0005524
Lele33g0960 953 Pfam PAN-like domain 459 526 IPR003609 -
Lele33g0960 953 ProSiteProfiles Bulb-type lectin domain profile. 131 263 IPR001480 -
Lele33g0960 953 Pfam Domain of unknown function (DUF3403) 909 953 IPR021820 GO:0004674
Lele33g0960 953 CDD B_lectin 140 268 IPR001480 -
Lele33g0960 953 MobiDBLite consensus disorder prediction 926 953 - -
Lele33g0960 953 ProSiteProfiles EGF-like domain profile. 401 439 IPR000742 -
Lele33g0960 953 SUPERFAMILY Protein kinase-like (PK-like) 620 906 IPR011009 -
Lele33g0960 953 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 601 710 - -
Lele33g0960 953 CDD STKc_IRAK 641 906 - -
Lele33g0960 953 SMART serkin_6 635 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0960 953 SMART ntp_6 460 540 IPR003609 -
Lele33g0960 953 SUPERFAMILY alpha-D-mannose-specific plant lectins 182 299 IPR036426 -
Lele33g0960 953 ProSiteProfiles PAN/Apple domain profile. 459 541 IPR003609 -
Lele33g0960 953 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 711 914 - -
Lele33g0960 953 Gene3D Transferase(Phosphotransferase) domain 1 711 914 - -
Lele33g0960 953 ProSiteProfiles Protein kinase domain profile. 635 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0960 953 Pfam S-locus glycoprotein domain 326 437 IPR000858 GO:0048544
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele33g0960 Lele-ChrLele33 15559054 15564370 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0960 575 923 Receptor kinase-like Gene Family AT3G45860 55.241 4.62e-126 395
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0960 PK_Tyr_Ser-Thr 1.2e-48 CL0016