Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0949 ATGATTCTTACACACACAACTATATTTTTTCTTCTTCTATTCCCAGTTTTCTTCATTCTATGTTTCCTTACTCTGTTCTCACATGCAGCGAGTTCCATCACCCAAGACAAATTTATCAGGGACGGACCAGACGGTGACACTCTACTCTCAGAAGATTTGACTTTCGAACTTGGATTCTTTAGTTTAAATAATAACAGCTCCTTGAGATACGTTGGAATTTGGTACTACAGGGTTCCCGGATCAGCATTCGTATGGGTTGCAAACCGAGACAAACCCATTGAAGGCAGACTAGGGGTTATAACTATTGGGAACGATGGAAATTTAGTCATCTTCGATGGAGATAAGAATCAAGTATGGTCGAGCAACGTATCGAACCTCAAGAATAACACAGAAGCTATTCTTGGAGATGATGGGAACCTTGTTCTTTCCACCAAGGATGATGAAAAAAAGATATGGAAAAGCTTTGATCATCCAACCGACACGTTTCTTCCAGGTATGACCATATCAGTGAATCCTTCAAAGGGTGAGATTCGACCTTTTGTGTCATGGAAATCTAGCACAGATCCTGCTCGAGGAAATTTCTCAATGGGAATTGACCCACGAGCATCAACCCAGATAGTGATTTGGGAAGGAGTAAAAAGGAGGTGGAGAAGTGGTTACTGGGATGGAAGAATATTCGCAGGAGTTTCAAACATGACAGGAAGTTATCTCTATGGATTCAGACTCAACACAGATGGAAATGGAGAAAGGCATTTAGCTTATGCCCCACTGCACATCACTGAGAAGGTAAGGTTTCAGATAGGTTGGGATGGGATTGAGAGGCAATTCAAATGGAACGAGGGTGAGAAACAGTGGAGCCGAACACAGGAAGAGCCATATAACGAATGTGAGATTTATAACAAGTGTGGGAGTTTTGCAGAATGCAGTTTGGTTTCTCCAATGAAATGTGTTTGCATAAGAGGGTTCGACCCGAAGGAAGTGGATGAGTGGACTCAAGGGAATTGGTCTGGTGGGTGTAAGAGGATGACACCATTGAAGGCTGAGAGGAATAATAACAGTAATAATGCTAGTTCTGTTTCTGCAACAGAAGTGAATGTTGAAGAAGATGGTTTTTTGCAGTTGCAATGCAGGAAGTTGCCTGATTTTGCGACCTTGGTCGGTTCTCAGGACAAGAAAGATTGTGAGAATTATTGCTTGCTGGATACGAATTGTACTGCATATACTTCTGTTAATGGAATTGGATGCCTGATTTGGCATGGTGAGTTACTTGATATCAAGGACTTTGAAGATGGAGGAGGAAATACAATCTATATTCGCCTTGCTCATTCTGATTTAGATGATGGAAAGAAGAAGATCAATATTGTGATAATAATTGCTATTGTGTTGGGGTTAATCTGCATCGGAATCTTTCTTTGGCTGGTGTGGAGGTTCAAGGGAAGAAAAGTAGTAGCTGCAGCTTCATGCTGCGAAATGAGCGATATTCCGGTTTTTGATATTACAAGAAGCAAGAGTAGACAAGTTTCAGCAGAATTTTCAGGATCAGCTGAGCTAAGTTTGGATGGTCATGAACTAAGTGGACCAGAACTTCCCTTGTTCAATTTTGATTGTATTGGAATAGCCACAGACAATTTCTCAGAGGAAAATAAGCTTGGGCAAGGAGGATTTGGTCCTGTCTACAAGGGAATCCTTCGTGGCGGCGAGCAAATTGCTGTCAAGAGGCTTTCAAGAAGATCTGGGCAAGGTCTAGAGGAGTTTAAGAATGAGATGATGTTGTTTGCCAAACTACAACATAGAAACCTTGTTAGATTATTAGGATGTTCAATTCAAGGAGAAGAGAAGTTGTTGGTATATGAATATATGCCAAACAAAAGCTTGGATCACTTTTTATTTGATCCTATCAAACAGCAACAACTAAACTGGAATAAGCGCTTTGAAATCATTGAAGGGATTGCTAGAGGGTTGCTTTATCTGCATCGAGATTCAAGACTTCGAATAATTCATCGAGATTTAAAAGCAAGTAATATTCTTTTAGATGAAAGAATGAACCCAAAAATTTCAGACTTTGGACTAGCTAGAATATTTGGAGGAGGCCAAAGTGAGGCAAATACTACTAGAGTAGTTGGCACATATGGCTATATGTCTCCTGAGTATGCTATGGAGGGACTATTCTCAGTTAAATCTGATGTCTATAGTTTTGGTGTATTATTCCTTGAGATTGTAAGCGGTCGCAAAAACACTAGCTTTCGTCATTCTGATGACTCAAGTCTCATAGGATACGCCTGGCATCTTTGGAATGAACACAGAGCAATGGAGCTTGTCGATCCTTCGATTCGCGATTCGATTCAAAGGAACCAGGTTTTGAGATGCATACACATAGGGATGTTGTGTGTGCAGGATTCAGCAGCTCATAGACCAACAATGTCTTCTGTGGTATTAATGCTAGAAAGCGAAACAACCAATCTTCCTTTGCCAAGACAACCTTTGCTTACTTCCATGAGAAGAAGATCAGAAGAGAGAGATTTTTACAGGGAAGGTCTTGATGTTTCCTTGAATGAACTTACAGTTACAATGGTGGTAGGAAGATAG 2586 0.4064 MILTHTTIFFLLLFPVFFILCFLTLFSHAASSITQDKFIRDGPDGDTLLSEDLTFELGFFSLNNNSSLRYVGIWYYRVPGSAFVWVANRDKPIEGRLGVITIGNDGNLVIFDGDKNQVWSSNVSNLKNNTEAILGDDGNLVLSTKDDEKKIWKSFDHPTDTFLPGMTISVNPSKGEIRPFVSWKSSTDPARGNFSMGIDPRASTQIVIWEGVKRRWRSGYWDGRIFAGVSNMTGSYLYGFRLNTDGNGERHLAYAPLHITEKVRFQIGWDGIERQFKWNEGEKQWSRTQEEPYNECEIYNKCGSFAECSLVSPMKCVCIRGFDPKEVDEWTQGNWSGGCKRMTPLKAERNNNSNNASSVSATEVNVEEDGFLQLQCRKLPDFATLVGSQDKKDCENYCLLDTNCTAYTSVNGIGCLIWHGELLDIKDFEDGGGNTIYIRLAHSDLDDGKKKINIVIIIAIVLGLICIGIFLWLVWRFKGRKVVAAASCCEMSDIPVFDITRSKSRQVSAEFSGSAELSLDGHELSGPELPLFNFDCIGIATDNFSEENKLGQGGFGPVYKGILRGGEQIAVKRLSRRSGQGLEEFKNEMMLFAKLQHRNLVRLLGCSIQGEEKLLVYEYMPNKSLDHFLFDPIKQQQLNWNKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDERMNPKISDFGLARIFGGGQSEANTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLFLEIVSGRKNTSFRHSDDSSLIGYAWHLWNEHRAMELVDPSIRDSIQRNQVLRCIHIGMLCVQDSAAHRPTMSSVVLMLESETTNLPLPRQPLLTSMRRRSEERDFYREGLDVSLNELTVTMVVGR 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0949 861 PIRSF SRK 2 861 IPR024171 GO:0004674
Lele33g0949 861 Gene3D Phosphorylase Kinase; domain 1 513 619 - -
Lele33g0949 861 ProSiteProfiles Protein kinase domain profile. 544 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0949 861 SUPERFAMILY Protein kinase-like (PK-like) 529 834 IPR011009 -
Lele33g0949 861 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 155 - -
Lele33g0949 861 ProSiteProfiles Bulb-type lectin domain profile. 40 155 IPR001480 -
Lele33g0949 861 SMART ntp_6 366 440 IPR003609 -
Lele33g0949 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672|GO:0006468
Lele33g0949 861 Gene3D - 26 155 IPR036426 -
Lele33g0949 861 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 805 - -
Lele33g0949 861 SMART blect_4 39 158 IPR001480 -
Lele33g0949 861 CDD PAN_AP_plant 365 441 - -
Lele33g0949 861 SMART serkin_6 544 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0949 861 CDD B_lectin 44 158 IPR001480 -
Lele33g0949 861 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 189 IPR036426 -
Lele33g0949 861 Pfam D-mannose binding lectin 83 184 IPR001480 -
Lele33g0949 861 Gene3D Transferase(Phosphotransferase) domain 1 620 822 - -
Lele33g0949 861 Pfam Protein tyrosine and serine/threonine kinase 547 812 IPR001245 GO:0004672|GO:0006468
Lele33g0949 861 ProSiteProfiles PAN/Apple domain profile. 366 441 IPR003609 -
Lele33g0949 861 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 509 619 - -
Lele33g0949 861 Pfam PAN-like domain 367 425 IPR003609 -
Lele33g0949 861 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 620 822 - -
Lele33g0949 861 CDD STKc_IRAK 550 815 - -
Lele33g0949 861 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0949 Lele-ChrLele33 14236754 14240295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0949 518 827 Receptor kinase-like Gene Family AT4G23230 62.058 2.45e-133 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0949 PK_Tyr_Ser-Thr 6.3e-48 CL0016