Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0947 ATGGGAAGTCACTGGATAATGAAGATAGGAAATGGGATAGTTATCTTATCTGTTATATTCCATCACTACTGCTTCTTGTTTTGTGCAGCTTCTGACACCATAACCATTAACAAACCGCTAAGAGATGGTGAGCTTCTAATTTCTAACGAAAAAATGTTTGCTCTCGGGTTCTTCACGCCTGGCAAATCAAACTATCGCTATGTAGGAATTTGGTACTACAACTTGCAACAGCAAACTGAAGTTTGGGTTGCAAACAGAGACGATCCCATTAATGATACTTCTGGTGTTCTCTCCATCAGCTCAGATGGAAATCTAGTTCTTCATAGTAACTACTCCGACATGACTATCTGGTCAACGAACGTTTCTATCACTGTTCCAAACACAAAAGTTATGGCTCAGCTCACAGATTCAGGTAACCTTGTTTTGACTCAAAAGGACTCCAAAACTGTTCTATGGCAAAGCTTTGATCATCCCACCGATACCTTGCTTCCTTTTGCCAATTTGGCAGTGAACAAAAGAACTGGTCAGAGCTGGTTCTTGCAGTCGTGGAAGACAGAAGATGATCCTGCAACAGGAAACTTCTCAATTAAGTTTAATACAAGTGGGAAATCTCAGTTATTCATGTACAATAATTACGCGCCATGGTGGCGAGCAGGGTCATACAATGGCGAAATGCTCATAGGTATACCATTTATGAAACGAGCAATGTCAACTTATTTTAAAATTACTTTCACTGATGATGATAATGAGATTGGAGTTGTATTTCACGCCTTTGACAAGACAAACATCTTGCGAGTGGTGGCTCTTCAATCGGGATTCTTTCAAGCGTTGCTATGGGATTATGATAAGAAACAATGGAATAGATATTGGTCTGCTCCAGAAGTGGATTGTGATAGCTATGGTTCTTGTGGTGCAAATGGAAATTGTGACCCTCTTAACTATGAAAATTTTAGGTGTTCTTGCCTAGCTGGGTTTGAACCCAAAAACCCAACGAATTGGTATCAACACAGCGATGCCACACAAGGTTGTGTGAGAAAGAAAGGACCATCTTTATGTGGGAATGGAGAAGGCTTTGTGAGAGTAGAAAGTGTGAAGATTCCTGATACAGCTGTGGCAAATGCAAATACGAAGTTGAGTTTGAAAGAATGTGAAAGAGAGTGCTTGAGAAATTGTTCTTGTAATGCTTATGCAGCTGCTGATGTGAGAAATGGTGGAAGTGGATGCTTGACTTGGCATGGGACTTTGATGGATACACAGATATTAAGTCAAGAAGGGCAAGATTTATTTGTTCGTGTTGATGCTATTGAACTTATGTTTTCTTTCTTCCTACTTTCCTCAGAAAAGTATGCTAGGAAATCAAAAGGAGAACTTGCTATGTCTTGGAGAGTGGGAATTGCAGTGGCTTGTGCCACTTTGGCTACTCTTATTACTGCCTTATCTGTGTGTTTCTTCTGGACCAAAAAAAGAAGAGATGAAATAGCCGAACAGGAATTGAAATTAAATTCTCCAACAGATGAGCAGAATAGTGAAAATAGATCACAACGAAGCTTATCATTTTTCAGCATCAAAACTATAATGACGGCAACGAACAATTTCTCAAATGAGAATCAATTAGGACAAGGTGGATTTGGTTCTGTGTACAAGGGAATATTAGTTAATGGACAAGAGATAGCGGTGAAAAGATTGTCCGAAGGTTCTGGACAAGGGACTCTAGAGTTCAAGAATGAAATTAAACTAATTGCAAAACTACAACACAGGAATCTTGTGAAATTGCTTGGATATTGCATTCATAAAGAAGAAAGGATGTTGATCTATGAGTACCTTCCCAACAAAAGCTTGAACTTCTTTCTCTTTGATAGGAGTCAAAGAACATCATTAGATTGGGACAAACGTTTTCATATTATATTTGGAATTGCTCGAGGTCTTCTCTATCTTCATCAAGATTCAAGGCTAAAAATAATCCATAGAGACCTTAAAGCTAGCAATGTCCTCTTAGATACTACAATGAATCCTAAAATATCAGATTTTGGCATGGCAAGAATATTTGGAGAAGATCAAATCCAAGCAAGAACTAGACGAATTGTTGGAACATATGGCTATATGTCTCCAGAATATGCAATGATAGGACAATATTCAACAAAGTCTGATGTTTTTAGCTTTGGTGTTCTTTTGTTAGAGATTATTAGTGGCAAGAGAAATACAGAATGTCATAAAGATGGAGGATCGGCAAATTTAATTGGACAGGTATGGAACTTGTGGAGAGAAGGAAAAACCTTGGAAATAGTGGATTCGACACTTGGTGAATCTTATCCTCTTGACATTGCTTTGAGGGGTATACAAATTGGGCTCTTGTGTGTACAAGAAAGTGCCTTATATAGGCCATCCATGTTGGAAGTTGTTTTCATGCTTGGCAATGAAATAACCATTCCCTCACCTCGAAAGCCAGCCTTTCTATTCAATTCTAACATAGAGCATTCAGAATCTTCAACATCTGGAGATCCTTCAGTAAACAATGTTTCAAATACTACAATTAGTGCTCGCTAA 2544 0.3844 MGSHWIMKIGNGIVILSVIFHHYCFLFCAASDTITINKPLRDGELLISNEKMFALGFFTPGKSNYRYVGIWYYNLQQQTEVWVANRDDPINDTSGVLSISSDGNLVLHSNYSDMTIWSTNVSITVPNTKVMAQLTDSGNLVLTQKDSKTVLWQSFDHPTDTLLPFANLAVNKRTGQSWFLQSWKTEDDPATGNFSIKFNTSGKSQLFMYNNYAPWWRAGSYNGEMLIGIPFMKRAMSTYFKITFTDDDNEIGVVFHAFDKTNILRVVALQSGFFQALLWDYDKKQWNRYWSAPEVDCDSYGSCGANGNCDPLNYENFRCSCLAGFEPKNPTNWYQHSDATQGCVRKKGPSLCGNGEGFVRVESVKIPDTAVANANTKLSLKECERECLRNCSCNAYAAADVRNGGSGCLTWHGTLMDTQILSQEGQDLFVRVDAIELMFSFFLLSSEKYARKSKGELAMSWRVGIAVACATLATLITALSVCFFWTKKRRDEIAEQELKLNSPTDEQNSENRSQRSLSFFSIKTIMTATNNFSNENQLGQGGFGSVYKGILVNGQEIAVKRLSEGSGQGTLEFKNEIKLIAKLQHRNLVKLLGYCIHKEERMLIYEYLPNKSLNFFLFDRSQRTSLDWDKRFHIIFGIARGLLYLHQDSRLKIIHRDLKASNVLLDTTMNPKISDFGMARIFGEDQIQARTRRIVGTYGYMSPEYAMIGQYSTKSDVFSFGVLLLEIISGKRNTECHKDGGSANLIGQVWNLWREGKTLEIVDSTLGESYPLDIALRGIQIGLLCVQESALYRPSMLEVVFMLGNEITIPSPRKPAFLFNSNIEHSESSTSGDPSVNNVSNTTISAR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0947 847 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 155 - -
Lele33g0947 847 ProSiteProfiles Bulb-type lectin domain profile. 31 155 IPR001480 -
Lele33g0947 847 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 189 IPR036426 -
Lele33g0947 847 Pfam D-mannose binding lectin 79 184 IPR001480 -
Lele33g0947 847 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Lele33g0947 847 SMART ntp_6 353 432 IPR003609 -
Lele33g0947 847 CDD PAN_AP_plant 349 432 - -
Lele33g0947 847 MobiDBLite consensus disorder prediction 825 847 - -
Lele33g0947 847 Gene3D Transferase(Phosphotransferase) domain 1 608 809 - -
Lele33g0947 847 CDD STKc_IRAK 538 803 - -
Lele33g0947 847 PIRSF SRK 6 847 IPR024171 GO:0004674
Lele33g0947 847 Gene3D Phosphorylase Kinase; domain 1 493 607 - -
Lele33g0947 847 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 608 811 - -
Lele33g0947 847 Gene3D Hepatocyte Growth Factor 351 430 - -
Lele33g0947 847 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 497 607 - -
Lele33g0947 847 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 795 - -
Lele33g0947 847 Pfam Protein tyrosine and serine/threonine kinase 535 734 IPR001245 GO:0004672|GO:0006468
Lele33g0947 847 ProSiteProfiles EGF-like domain profile. 293 331 IPR000742 -
Lele33g0947 847 ProSiteProfiles Protein kinase domain profile. 532 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0947 847 SMART serkin_6 532 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0947 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Lele33g0947 847 Gene3D - 26 156 IPR036426 -
Lele33g0947 847 ProSiteProfiles PAN/Apple domain profile. 352 433 IPR003609 -
Lele33g0947 847 Pfam S-locus glycoprotein domain 216 329 IPR000858 GO:0048544
Lele33g0947 847 Pfam PAN-like domain 352 418 IPR003609 -
Lele33g0947 847 SMART blect_4 37 158 IPR001480 -
Lele33g0947 847 CDD B_lectin 37 158 IPR001480 -
Lele33g0947 847 SUPERFAMILY Protein kinase-like (PK-like) 516 819 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0947 Lele-ChrLele33 13617043 13622017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0947 450 847 Receptor kinase-like Gene Family AT4G05200 48.418 6.63e-127 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0947 PK_Tyr_Ser-Thr 1.4e-47 CL0016