Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0946 ATGAAATCCAACTACTTAACCTCCTTTCATAATATTAAAGTCTCACTGTTCTTCTGTTCTGCAAAACCAGACATTATGCGAAGTTTCACTAATAACCTCCTCCTCCTTTTCTGGTTCTTCTTCATCACTTTCATCTCTTTCTTCCCTGCAATTTCATTCTCTTCTGATACCTTGAATTCAACCCAATCTCTCAAAACCACAGACACACTTTTGTCAGCAAAGCAAACTTTCGTTCTGGGTTTCTTCTCTTCAGATGAATCAAGATACTACCTGGGAATCTGGTACAAGAACATTGAAGAACGTACGACGGTTTGGGTCGCAAACAGAGACAACCCACTTGAGGATTCCAATGGGTTACTCAAGATCGGAGACTCAGGAAACATAGAGATAGTGGATCGAACCGGGAAACCCATATGGTCATCATCATCGAACCAAACCGCCACAGCGAAAAACCCAGTTCTTCAGATTCTCGATTCTGGGAATCTGATTATCAGAGAATCTTCATCATCTACCTCGAATTCCTTGTGGCAAAGCTTCGATTACCCCACAGACACACTGTTACCAGGAATGAAGCTTCTGTATAACTTTGACACAAAAATGGAGAAACATTTAACATCATGGAGGTCAAAACATGATCCATCCACAGGTGTTATCTCCTTCAAGCTCGACTTCCATGGCCTCCCAGAGATTTTCCTATGGAACAACAACACCAAACTTTACAGAAGTGGACCTTGGAATGGCATCAGATTCAGTGGGGTACCAGAAATGAAATCAGACACAGACACAATCAAGTTCGATTTCTACGAGGATGAACACCAATTATACTACACATTCAACATCGGAAGCCAATCATTATATTCAAGACTCACTGTAACTCCTGATGGTCAACTTCAACGTTTAACTTGGGTACCAGATAACCAAATTTGGACCCAATTCTGGATTGCTCCGAAAGATCAATGCGATAACTACAAAGAATGTGGACCTTATGGGATATGTGACACGAACGCTTCACCAGTTTGTACATGTATGAAAGGTTTCAGCCCTAAGAACATGCAAGCATGGAATCTAAGAGATGGTTCTGATGGGTGTGTGAGGAATAATAAGTTGAATTGTGGGACTGATAAGTTCTTGAAGATACAGAACGTGAAGTTGCCGGAAACAACCTCGGTGTTGGTGAATAGAACCTTGAACTTAATGCAGTGTGAAGGTTTGTGTTGGAAGAATTGTTCCTGCACTGCTTATGCCAACATAGATATCAGCAATGGAGGAACTGGTGGGTGTATTATGTGGATTGATGAACTTGTAGATATGAGGGTTTATACTGATGGAGGGCAAGATCTGTATGTCAGATTAGCAGCTTCCGATGTTGGTGGATCTAAGAACAATGTGGAATCTAAGGCTATAGGCATTACAGTTGCCATAGTTGTTGTACTAGTGGGATTACTAATTTATTTCATCTGGAAGAGAAGGAAATTGCAAAGAATGTTGAAAGGGAGGACTGAATCTAGAGGTGGTTTTGAGAGAAGTCAAGATTCTCTAAAGAAAGAGTCAGTGTTCACAAGTAATAGAGGAAACTCTGGTGAATGTGAGATGGATGAACTAGAGTTGCCATTGTTTGATTTTAACACCATATCAATGACTACAAACAACTTCTCTGAAGATAACAAGCTTGGAGAAGGAGGCTTTGGTAGCGTTTACAGGGGTAGATTACTGGAAGGTCAAGAAATTGCTGTGAAAAGGTTATCAAAAAACTCTGGGCAAGGAGCTGAACAATTTAAGAATGAGGTTAGGTTAATTGTGAGACTTCAACATCGGAATCTTGTTCGATTGTTTGGTTGTTGTGTTGAGATGGATGAGAAGATACTAATTTATGAGTACATGCAGAATAGAAGCCTTGATTCCATTTTGTTTGATAAAGCAAGAAGATCTATATTGAATTGGCAAAAGCGTTTCTACATCATATGTGGAATTGCAAGAGGACTTCTTTACTTGCATCAAGATTCTAGATTTAGGATCATCCATCGCGATCTTAAAGCTAGTAATGTATTACTTGACGAAAAAATGAATCCAAAGATATCAGATTTTGGAATGGCAAGAATTTTCGGAACAAATCAAACAGAAGCAAATACATTGAGAGTTGTTGGGACATATGGCTACATGTCTCCTGAATATGCTATGGATGGACTCTTCTCAATAAAGTCCGATGTTTTTAGTTTTGGGGTTCTAGTACTTGAGATTGTAACTGGAAGGAAGAACAGAGGGTTCTATTACTCAAATGACGAATTAAATCTTCTTGGACATGCATGGAATCAATGGAAAGAAGGAAAAGCACTCGAACTGATCGATCCATCGATAGCAGATTCATATTCGCCAGCCGAAGTTCTTCGGTGCATACAAGTCGGACTCCTATGTGTTCAAGAGCGTGCAGAAGATCGGCCAACAATGTCCACCGTAGTATTGATGTTGAGTAGTGAAACTGTATTAATGCCACAACCTAAAGGCCCTGGGTTTTGTGTAGGAAGAAACCCTAATGAAACAGAGTCTTCTACAAGTAAGCAAGACCAATCATATAGTGTGAATGAAGTCACAGTCACAATGCTACATGCTAGGTAG 2613 0.3995 MKSNYLTSFHNIKVSLFFCSAKPDIMRSFTNNLLLLFWFFFITFISFFPAISFSSDTLNSTQSLKTTDTLLSAKQTFVLGFFSSDESRYYLGIWYKNIEERTTVWVANRDNPLEDSNGLLKIGDSGNIEIVDRTGKPIWSSSSNQTATAKNPVLQILDSGNLIIRESSSSTSNSLWQSFDYPTDTLLPGMKLLYNFDTKMEKHLTSWRSKHDPSTGVISFKLDFHGLPEIFLWNNNTKLYRSGPWNGIRFSGVPEMKSDTDTIKFDFYEDEHQLYYTFNIGSQSLYSRLTVTPDGQLQRLTWVPDNQIWTQFWIAPKDQCDNYKECGPYGICDTNASPVCTCMKGFSPKNMQAWNLRDGSDGCVRNNKLNCGTDKFLKIQNVKLPETTSVLVNRTLNLMQCEGLCWKNCSCTAYANIDISNGGTGGCIMWIDELVDMRVYTDGGQDLYVRLAASDVGGSKNNVESKAIGITVAIVVVLVGLLIYFIWKRRKLQRMLKGRTESRGGFERSQDSLKKESVFTSNRGNSGECEMDELELPLFDFNTISMTTNNFSEDNKLGEGGFGSVYRGRLLEGQEIAVKRLSKNSGQGAEQFKNEVRLIVRLQHRNLVRLFGCCVEMDEKILIYEYMQNRSLDSILFDKARRSILNWQKRFYIICGIARGLLYLHQDSRFRIIHRDLKASNVLLDEKMNPKISDFGMARIFGTNQTEANTLRVVGTYGYMSPEYAMDGLFSIKSDVFSFGVLVLEIVTGRKNRGFYYSNDELNLLGHAWNQWKEGKALELIDPSIADSYSPAEVLRCIQVGLLCVQERAEDRPTMSTVVLMLSSETVLMPQPKGPGFCVGRNPNETESSTSKQDQSYSVNEVTVTMLHAR 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0946 870 SMART serkin_6 551 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0946 870 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 515 626 - -
Lele33g0946 870 Gene3D Phosphorylase Kinase; domain 1 526 626 - -
Lele33g0946 870 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 38 813 - -
Lele33g0946 870 SMART ntp_6 371 451 IPR003609 -
Lele33g0946 870 ProSiteProfiles PAN/Apple domain profile. 371 452 IPR003609 -
Lele33g0946 870 Pfam D-mannose binding lectin 102 208 IPR001480 -
Lele33g0946 870 ProSiteProfiles Bulb-type lectin domain profile. 55 177 IPR001480 -
Lele33g0946 870 ProSitePatterns Protein kinases ATP-binding region signature. 557 579 IPR017441 GO:0005524
Lele33g0946 870 CDD B_lectin 61 182 IPR001480 -
Lele33g0946 870 Pfam S-locus glycoprotein domain 240 350 IPR000858 GO:0048544
Lele33g0946 870 SMART blect_4 55 182 IPR001480 -
Lele33g0946 870 ProSiteProfiles Protein kinase domain profile. 551 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0946 870 CDD STKc_IRAK 557 822 - -
Lele33g0946 870 Pfam Receptor serine/threonine kinase 507 541 IPR022126 GO:0004674
Lele33g0946 870 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 50 179 - -
Lele33g0946 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 672 684 IPR008271 GO:0004672|GO:0006468
Lele33g0946 870 Pfam Domain of unknown function (DUF3403) 824 870 IPR021820 GO:0004674
Lele33g0946 870 Gene3D - 50 179 IPR036426 -
Lele33g0946 870 PIRSF SRK 26 870 IPR024171 GO:0004674
Lele33g0946 870 CDD PAN_AP_plant 368 452 - -
Lele33g0946 870 SUPERFAMILY alpha-D-mannose-specific plant lectins 103 213 IPR036426 -
Lele33g0946 870 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 627 830 - -
Lele33g0946 870 Pfam PAN-like domain 371 437 IPR003609 -
Lele33g0946 870 Gene3D Transferase(Phosphotransferase) domain 1 627 829 - -
Lele33g0946 870 SUPERFAMILY Protein kinase-like (PK-like) 530 822 IPR011009 -
Lele33g0946 870 Pfam Protein tyrosine and serine/threonine kinase 554 820 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0946 Lele-ChrLele33 13156456 13162716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0946 539 870 Receptor kinase-like Gene Family AT4G11530 57.101 1.08e-131 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0946 PK_Tyr_Ser-Thr 1.2e-47 CL0016