Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0943 ATGCGCAGCTTCACTTTCTTTCAACGAGTATCAACAGCTTTTCAAGACCATTCCTCGCATTTTAAACTTGCAGTCCTCTGCACCGTAAGTGGAGGCGGGCTTTTGGCTTATGCGGAGGCGGCTTCATCTGAAGCGATCAGCGACAAGAAGAAGGTGGTGGTTCTGGGAACCGGATGGGCAGGCACAAGCTTTTTGAAGAATCTGAATAACCCGAGATATGAGGTTCAGGTGGTATCGCCTCGCAATTATTTTGCATTCACCCCCTTGCTTCCTAGTGTTACATGCGGTACAGTCGAAGCACGCAGCATTGTTGAACCCGTTCGCAATTTTTTCAGGAAGAAAAAGATGGACTTTCAATTCAGTGAAGCAGAATGTGTGAAGATAGATGAAGAAAACAGGAAAATTTACTGCCGATCCAGTATAGAAAATAATTTGAATGAGAAAGAATTCGTTGTGGATTATGACTACCTCATCATAGCTGTGGGAGCTAATGTCAACACATTCAATACTCCAGGAGTGGTGGAGAATTGCCTTTTCTTGAAGGAAGTAGAAGATGCTCAAAAAATCAGAAGAGTTGTTATTGACTGCTTTGAGAGAGCAAGTCTGCCAAATGTTAGTGAAGAAGAGAAGACGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGCCCAACTGGAGTGGAATTTGCAGCATCACTTCATGACTTTGTCAACGAGGATCTGGTCAAATTATATCCCAAGATAAAAGATCTTGTTAAAATTACGCTTCTGGAGGCAGGAGATCACATTTTAGGAATGTTTGACAAACGAATCACTGCTTTTGCTGAAGAAAAGTTTCGGAGAGATGGTATAGATGTAAAAACAGGATCCATGGTCGTCAAAGTGTCTGGGAAAGAAATCTCTACTAAAGAAATGAAAAATGGAGGAAAATTTTCTACAATTCCTTATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTCATTAAAGATTTCATGAAGCAAATTGGTCAGGCTAACAGGCGCGCTGTAGCTACAGATGAATGGTTGAGAGTTGAGGGTTGCGACAATGTGTATGCACTTGGTGATTGTGGTACAATAAAACAGCGAAAAGTCATGGAAGATATTGCTGCAATCTTTAAGAAGGCTGACAAAGACAATTCAGGAACACTTACTGTCAGAGAGTTTCATGAGGTCATTGATGACATTTGTGAAAGATACCCTCAGGTTGAGCTATATTTGAAGAATAAGCAGATGAGCAGTATTGCTGATCTTTTGAAGGAAGCCAAGGGAGATGCTGAAAAAGAATCCATTGAACTAAATATTGAAGAATTCAAGACCGCACTTTCCAATGTGGATTCTCAGATGAAATTTCTTCCTGCTACTGCACAGGTTGCTTCTCAACAAGGAACCTACCTTGCCAAGTGTTTCAACCGGATGGAAGAGTGCGAGAGAAATCCAGAGGGTCCTCTCAGGTTCAGGGGAGAGGGTCGCCATCGGTTCAAACCCTTTAGGTACAAGCATTTTGGTCAGTTTGCTCCTCTTGGAGGAGAGCAGACAGCTGCACAGCTTCCTGGGGATTGGGTATCAATAGGCCACAGCACTCAATGGCTATGGTATTCTGTGTATGCAAGCAAGCAAGTCAGCTGGCGCACTAGGGCCCTAGTAGTATCAGACTGGACACGACGTTTCATTTTCGGGAGGGACTCAAGTCAAATCTGA 1725 0.4307 MRSFTFFQRVSTAFQDHSSHFKLAVLCTVSGGGLLAYAEAASSEAISDKKKVVVLGTGWAGTSFLKNLNNPRYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNFFRKKKMDFQFSEAECVKIDEENRKIYCRSSIENNLNEKEFVVDYDYLIIAVGANVNTFNTPGVVENCLFLKEVEDAQKIRRVVIDCFERASLPNVSEEEKTRILHFAIVGGGPTGVEFAASLHDFVNEDLVKLYPKIKDLVKITLLEAGDHILGMFDKRITAFAEEKFRRDGIDVKTGSMVVKVSGKEISTKEMKNGGKFSTIPYGMAVWSTGIGTRPFIKDFMKQIGQANRRAVATDEWLRVEGCDNVYALGDCGTIKQRKVMEDIAAIFKKADKDNSGTLTVREFHEVIDDICERYPQVELYLKNKQMSSIADLLKEAKGDAEKESIELNIEEFKTALSNVDSQMKFLPATAQVASQQGTYLAKCFNRMEECERNPEGPLRFRGEGRHRFKPFRYKHFGQFAPLGGEQTAAQLPGDWVSIGHSTQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0943 574 Gene3D - 416 573 - -
Lele33g0943 574 Gene3D - 41 403 - -
Lele33g0943 574 SUPERFAMILY EF-hand 330 461 IPR011992 -
Lele33g0943 574 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 418 573 - -
Lele33g0943 574 SMART efh_1 376 404 IPR002048 GO:0005509
Lele33g0943 574 Pfam Pyridine nucleotide-disulphide oxidoreductase 50 374 IPR023753 GO:0016491
Lele33g0943 574 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
Lele33g0943 574 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Lele33g0943 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 52 71 - -
Lele33g0943 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 215 233 - -
Lele33g0943 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 154 172 - -
Lele33g0943 574 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 40 401 - -
Lele33g0943 574 SUPERFAMILY FAD/NAD(P)-binding domain 49 267 IPR036188 -
Lele33g0943 574 PANTHER NADH DEHYDROGENASE 41 574 IPR045024 GO:0003954|GO:0006116
Lele33g0943 574 SUPERFAMILY FAD/NAD(P)-binding domain 215 369 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0943 Lele-ChrLele33 12745005 12755595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0943 1 574 Chloroplast and Mitochondria Gene Families AT4G21490 73.540 0.0 874