Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0936 ATGAAAGTAACAATTGCCATTTCAGTCTCGATTGGAGGCATTATTGTTGCTGCATGCTCATATTTCTTATGGGCAAATGCTGCTAAATCTAAAGAATATGCAATAAAAGGATTATTTTCAGAAAAATCAGATGTATTTAGCTTTGGAGTCTTGTTACTCGAGATTATTAGTGGAAGGAGAAGCATTGACTTCTATAGTGAGGAAATGTCATTAAGCCTCCAGGGATATGCTTGGAAACTATGGAATGAAAACAACGCTGCATCTTTCATTGATTCAAAGATGGGTAATCCAAGCTGTCAAAAAGATATCGTGAGATGTCTACATATTGGACTTCTATGTGTGCAAGAGCTTGCAAGTGATAGGCCAAATATGTCTCTTGTAACTTCTATGATTTGCAGTGAGATCATAGATCTTGCCTTACCAAAACAACCTGCTTTCACTATTGCAGAATTTTCTCAACAAAATGGTGGAGATTGTTCTATCAATAGGGTCACTTTGACGGACATTCAAGTAAGATGA 519 0.3661 MKVTIAISVSIGGIIVAACSYFLWANAAKSKEYAIKGLFSEKSDVFSFGVLLLEIISGRRSIDFYSEEMSLSLQGYAWKLWNENNAASFIDSKMGNPSCQKDIVRCLHIGLLCVQELASDRPNMSLVTSMICSEIIDLALPKQPAFTIAEFSQQNGGDCSINRVTLTDIQVR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0936 172 Gene3D Transferase(Phosphotransferase) domain 1 22 139 - -
Lele33g0936 172 Pfam Protein tyrosine and serine/threonine kinase 32 128 IPR001245 GO:0004672|GO:0006468
Lele33g0936 172 SUPERFAMILY Protein kinase-like (PK-like) 32 130 IPR011009 -
Lele33g0936 172 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Lele33g0936 172 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0936 Lele-ChrLele33 11884304 11885920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0936 30 148 Receptor kinase-like Gene Family AT4G23150 47.500 3.36e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0936 PK_Tyr_Ser-Thr 1.2e-06 CL0016