Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0927 ATGAAAGTAACAATTGCCATTTCAGTCTCGATTGGAGGCATTATTGTTGCTGCATGCTCATACTTCTTATGGGCAAATGCTGCTAAATCTGAAGATCCAAAGAAAGTTATCATCTTAGATTGGACTAAGCGTTATGCTATAATAGAAGGAATTGCTCGAGAATATGCAATAAAAGGATTATTTTCAGAAAAATCAGATGTATTTAGCTTTGGAGTTTTGTTACTCGAGATTATTAGTGGAAGGAGAAGCATTGACTTCTATAGTGAGGAAATGTCATTAAGCCTCCAGGGATATGCTTGGAAACTATGGAATGAAAACAACGCTGCATCTTTCATTGATCCAAAGATGGGTAATCCAAGCTGTCATAAAGATATCATGAGATGTCTACATATTGGACTTCTATGTGTGCAAGAGCTTGCAAGTGATAGGCCAAATATGTCTCTTGTAACTTCTATGATTTGCAGTGAGATCATAGATCTTGCCTTACCAAAACAACCTGCTTTCACTATTGCAGAATTTTCTCAACAAAATGGTGAAGATTGTTCTATCAATAGGGTCACTTCGACGGACATTCAAGTAAGATGA 585 0.3658 MKVTIAISVSIGGIIVAACSYFLWANAAKSEDPKKVIILDWTKRYAIIEGIAREYAIKGLFSEKSDVFSFGVLLLEIISGRRSIDFYSEEMSLSLQGYAWKLWNENNAASFIDPKMGNPSCHKDIMRCLHIGLLCVQELASDRPNMSLVTSMICSEIIDLALPKQPAFTIAEFSQQNGEDCSINRVTSTDIQVR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0927 194 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 53 190 - -
Lele33g0927 194 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Lele33g0927 194 Pfam Protein tyrosine and serine/threonine kinase 51 150 IPR001245 GO:0004672|GO:0006468
Lele33g0927 194 SUPERFAMILY Protein kinase-like (PK-like) 52 172 IPR011009 -
Lele33g0927 194 Gene3D Transferase(Phosphotransferase) domain 1 26 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0927 Lele-ChrLele33 10504324 10505916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0927 51 170 Receptor kinase-like Gene Family AT4G23140 45.833 1.12e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0927 PK_Tyr_Ser-Thr 7.3e-07 CL0016