Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0898 ATGGGATTCAAAATCAGAAGTCTCGATTTGATAAAACTTCTTCTCGTCGCACTTTTCAATTTCCATTTGGGTTTGATGAGCTCGGCAACAACGGATACCATCTCCTCAGGCCAAATCATTAGAGACCATGAAATTGTGAGCTCCAATGGCAGTTACTTCAAGCTTGGATTCTTCAGCCCTCAAAATTCCGCAAACCGCTATCTAGGAATCTGGTATCTTGCTGAATCTAACATCATCTGGGTGGCTAACAGAAACCAACCACTTTTTGATGTTTTGGGGGTTGTGACAATCTCTAATAAGGATGGGAATCTTGTCGTTTTAGACAAACAGAATATGATTATCTGGTCCACAAATGTCTCAAATATAGCACCCAATAACAATTCTACTGCAAAACTTTTAGACAATGGGAATCTTGTCCTCTCTGATGACAACACAGGAGAAACTATTTGGGAGAGTTTTCAACATCCTTCAAATGTTTTTGTACCAAAGATGAAGATTAGTATCAACAAGATAACTGGTGAGAAGATGAAACTTACATCATGGAAAAGTCTTGCTGATCCATCCACTGGATTTTATTCTGTTTCTCTTGAACACCCAGATGCTCCTGACCTTTTTGCTTGGTTTAATGGAACTCGGCCGTTTTCTCGAACCGGTCCATGGAACGGGAGGACTTTTATAGGAAGACCCCAGATGCCAAAGGAGTATCTTAATGGATGCTATGTCAAAAATGAAGATGATGGAAAAGTTTATGTAACTTGTGATTTTGCAGATGATACCCGTTTTGCAATTCTTAGCTTGAATCCACAAGGCCAACTTTGGATTGCATTGTGGAATAACAAAAGAGAAATCATAAGGTATATGTTGAATATAACTTATTGTGATCATTATGGCATGTGTGGGGCATTTGGAAGCTGTGACTCATCCCAAAGATCACCAACTTGTAACTGTTTGGATGGGTATGAACCAAAGAAAATAGAGGAATGGAATAGGAAAAATTGGACTAGTGGGTGTGTGAGGAAGAAGCCATTGCAATGTGATGAGGGGTTGGGAAATAGAAGTGAAGTATATGAAAAGAATGGGTTTCTAAAACTTGAGAAAATGAAAGTACCGGACTTTTTGGTGAGGTCAAGTTCCCCAGATCAAGATAATTGTAGAACGAAGTGCTTGGATAATTGTTCATGCGTGGCATATGCGTTTGATTTTGATGGCATTGGATGCATGCATTGGAGTGGAGACTTGATTGACCTACAAAAATTCTCTAGTGGAGGGGTTGATCTTTATGTTCGTGTGCCTTTGTCCGAACTCGAAACACATTCACACAAAAGAAGAACCATTGCAATTGGAGCTGTGGCAATAGGAGTTATTACTTTAACTGCATGTGCATATATCTTATGGAAATTGACCTCTAAGTATGCAGGTGGGACATCTTTGCATAATCAGTCTCAAAGTATGATTCGTCAACAAGAAGAAATCAAAATGGATGACGAGCTTCAACTTTTTGATTTCGAGGAGCTTGTAAGTGCAACAAACAACTTCCACTCAACAAACATGCTTGGACGTGGTGGTTTTGGTTTGGTGTACAAGGTGATTTATTTTGGAATGGCCAGAATATTCAGAAGCGATGAAGATCAAGCTAGAACTAGAAGAGTCGTGGGGACATTTGGTTATATATCTCCTGAATATGCAATGCAAGGACAATTTTCTGAAAAATCAGATGTATTCAGTTTCGGAGTTCTATTGCTAGAGATTGTTAGTGGGAGAAGCAATTCTAGATTGCATAACAACATGGATGGATCTCAAACCCTTTTAGGATATGCATGGAAGCTATGGAATGAAGATAACCTTATGTCTTTTATAGACTCAGGAATACATTATGAAGGTTCTTGTGGTGATAATGATATTTTGCGGTGTATACGCATAGGACTTCTTTGTGTACAAGAATTAGCAAAAGAGAGGCCAACTATGGACAATGTAGCGTCAATGCTTAGTAGTGAGATTGTGAATCTTCCTCCTCCAAAGCAACCTTCATATGTACTAAATGAGACAGGATTTAGTTCTTCAGAAACACAAGCTTTGCACTCTACTAACTTTGTTAGCATCACTGATGTAATTGGGAGATAA 2121 0.3885 MGFKIRSLDLIKLLLVALFNFHLGLMSSATTDTISSGQIIRDHEIVSSNGSYFKLGFFSPQNSANRYLGIWYLAESNIIWVANRNQPLFDVLGVVTISNKDGNLVVLDKQNMIIWSTNVSNIAPNNNSTAKLLDNGNLVLSDDNTGETIWESFQHPSNVFVPKMKISINKITGEKMKLTSWKSLADPSTGFYSVSLEHPDAPDLFAWFNGTRPFSRTGPWNGRTFIGRPQMPKEYLNGCYVKNEDDGKVYVTCDFADDTRFAILSLNPQGQLWIALWNNKREIIRYMLNITYCDHYGMCGAFGSCDSSQRSPTCNCLDGYEPKKIEEWNRKNWTSGCVRKKPLQCDEGLGNRSEVYEKNGFLKLEKMKVPDFLVRSSSPDQDNCRTKCLDNCSCVAYAFDFDGIGCMHWSGDLIDLQKFSSGGVDLYVRVPLSELETHSHKRRTIAIGAVAIGVITLTACAYILWKLTSKYAGGTSLHNQSQSMIRQQEEIKMDDELQLFDFEELVSATNNFHSTNMLGRGGFGLVYKVIYFGMARIFRSDEDQARTRRVVGTFGYISPEYAMQGQFSEKSDVFSFGVLLLEIVSGRSNSRLHNNMDGSQTLLGYAWKLWNEDNLMSFIDSGIHYEGSCGDNDILRCIRIGLLCVQELAKERPTMDNVASMLSSEIVNLPPPKQPSYVLNETGFSSSETQALHSTNFVSITDVIGR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0898 706 CDD B_lectin 38 156 IPR001480 -
Lele33g0898 706 Pfam PAN-like domain 357 416 IPR003609 -
Lele33g0898 706 SMART ntp_6 356 430 IPR003609 -
Lele33g0898 706 PIRSF SRK 528 706 IPR024171 GO:0004674
Lele33g0898 706 PIRSF SRK 5 531 IPR024171 GO:0004674
Lele33g0898 706 ProSiteProfiles PAN/Apple domain profile. 345 431 IPR003609 -
Lele33g0898 706 Gene3D Transferase(Phosphotransferase) domain 1 507 668 - -
Lele33g0898 706 Pfam D-mannose binding lectin 78 182 IPR001480 -
Lele33g0898 706 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 187 IPR036426 -
Lele33g0898 706 SUPERFAMILY Protein kinase-like (PK-like) 528 694 IPR011009 -
Lele33g0898 706 ProSiteProfiles Bulb-type lectin domain profile. 31 153 IPR001480 -
Lele33g0898 706 CDD PAN_AP_plant 342 431 - -
Lele33g0898 706 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 653 - -
Lele33g0898 706 SMART blect_4 37 156 IPR001480 -
Lele33g0898 706 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 153 - -
Lele33g0898 706 Pfam Protein tyrosine and serine/threonine kinase 526 661 IPR001245 GO:0004672|GO:0006468
Lele33g0898 706 CDD PKc 471 583 - -
Lele33g0898 706 Pfam S-locus glycoprotein domain 216 323 IPR000858 GO:0048544
Lele33g0898 706 SUPERFAMILY Protein kinase-like (PK-like) 481 532 IPR011009 -
Lele33g0898 706 ProSiteProfiles EGF-like domain profile. 289 326 IPR000742 -
Lele33g0898 706 SUPERFAMILY Hairpin loop containing domain-like 359 427 - -
Lele33g0898 706 Gene3D - 26 154 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0898 Lele-ChrLele33 9262798 9266759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0898 528 706 Receptor kinase-like Gene Family AT4G11480 44.503 3.91e-42 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0898 PK_Tyr_Ser-Thr 4.4e-11 CL0016