Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0889 ATGAAGAAGTGTGAGCTCTGCAACTCTCCTGCAAAACTGTTCTGTGAATCAGACCAGGCTGATCTCTGTTGGGTATGTGATTCCAAGGTTCACTCTGCTAATTTCGTTGTAATAAAACATTCCAGAATCCTTCTCTGCCATCTTTGTCAATCTTTTACTCCTTGGCGTGGTTCTGGACCCAAGTTTGTTCCCACCATGTCTGTTTGTAATGATTGTGCCACCAAAAAGAATGAAGGATTGGGACAACGGAACGATGACGAAGATGGTGGCGAAGATGAAGAAGAAAAAGGCGACGATGAAGAAGATGAAGTCAGAGGAGGAGGAGATGATGATGAAGAAAATCAAGTGGTTCCGTGGAAATGTTCGCCAACACCTCCAGTTTCAAGTTTTTCAAACAGTTCAAACAATTCTTCGAGGTTCTCAGATTAG 429 0.4289 MKKCELCNSPAKLFCESDQADLCWVCDSKVHSANFVVIKHSRILLCHLCQSFTPWRGSGPKFVPTMSVCNDCATKKNEGLGQRNDDEDGGEDEEEKGDDEEDEVRGGGDDDEENQVVPWKCSPTPPVSSFSNSSNNSSRFSD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0889 142 SMART bboxneu5 1 45 IPR000315 GO:0008270
Lele33g0889 142 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Lele33g0889 142 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 137 - -
Lele33g0889 142 MobiDBLite consensus disorder prediction 121 142 - -
Lele33g0889 142 CDD Bbox1_BBX-like 3 45 - -
Lele33g0889 142 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Lele33g0889 142 Gene3D Classic Zinc Finger 1 37 - -
Lele33g0889 142 MobiDBLite consensus disorder prediction 75 142 - -
Lele33g0889 142 MobiDBLite consensus disorder prediction 85 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0889 Lele-ChrLele33 9026399 9026827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0889 2 105 C2C2-CO-like Transcription Factor Family AT4G27310 52.830 1.10e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele33g0889 zf-B_box 6.4e-09 No_clan