Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0888 ATGGAATTCTTCTCTGTTCATGCCAGACTATGCTCTTTGGTAATCATATTATGCCTCTATTTGGATTTTGGAAGTGCCACAGACACCATAACATCATCCCAATTCATAAAGGACCCTGCAACTCTTAGCTCCAATGGCAATTTCTTCACACTAGGGTTCTTCAGTCCTGAAAATTCGACAAATCGCTATGTGGGAATATGGTACATGTCCGAATCGAATATTGCATCAAATACCACCTGCCGGCTTTTAGATTCTGGAAACCTTGTCCTGCTTGATAACAATAGAGGAAATATCATATGGCAAAGTTTCGAGCATCCTTCAATGGCATACCTACCAAGCATGAAAATTAGTAGCAACAAAATAACAGGTACGAGAGTGAAATACATATCATGGAGAAGTCCATCAGATCCATCACTTGGGAATTTCTACATGAGTCTTGAACGACTAGATCTTCCTGAATTGTTTATATGGAATGGAACTCGCCCTCACTGGCGCAGTGGTCCATGGAATGACAGAACCTTCACAGGGTTGCCTGTGATGAATGTGATGAATTCTCAGTATAATAATGGTGCCAATATAGTGACTGAAATGGATGGGACTGTTTATTATATTTTGAACTTACAAAATGGGTCTGACTTCAAAGGATTCGGCGTCCTGAATTCAAAAGGGAATTTGTTATATAAACGATGGGACGATGCAAAGAAGAAATGGCAAGAAACCAAGGTTGCTCCACAATCAGACTGTGATATTTATGGTATATGCGGGCCATTTGGAAGCTGCAATTCAAGGAGCTCACCAATCTGCAATTGTTTGAGAGGATTTGAACCAAGCAGCAGAGAGGAGTGGAATAGACAAAAATGGGATGGTGGCTGTGTCAGAAGAACAGCTCTACAATGTGGGAGAGTAAAAACTGGGACTGGAGATGGAAACAAAGATGGGTTTTTCCATCTGCAAAACATTAAACTACCAGATTTTGGAAAATGTGGCTACATGTCCCCAGAATATGCAATGGAAGGATTGTTTTCAGAAAAATCAGATGTATTTAGCTTTGGAGTCTTAATGTTAGAGATTGTTGCAGGAAGAAGAAACTCTAGCTTTTATAATGATGAGAATTCCCTAAGCCTTTTAGGATTTGCATGGAAATCATGGAATGAAGAGAATTTGGTGCCACTAATAGATCCAGAAATATTTGATCCATACCTAAAGGAGGGCATTTTGAGATGTATACACATAGGACTTTTGTGCGTGCAAGACCTTGCAAGAGAGAGGCCAAGTATGAGCACCATAATTTCTATGCTTAACAGTGAGATTGTGAATCTTCCCAATCCAAGGCAACCTGCATTCATCCAGTGGCAGAGTATATTTAGTTCAATGCCCCATGAACAAAGTCATGGATTATTCTCAAACAATAATGTCAGTATTACAGAGATAAATGGCAGATAG 1443 0.3971 MEFFSVHARLCSLVIILCLYLDFGSATDTITSSQFIKDPATLSSNGNFFTLGFFSPENSTNRYVGIWYMSESNIASNTTCRLLDSGNLVLLDNNRGNIIWQSFEHPSMAYLPSMKISSNKITGTRVKYISWRSPSDPSLGNFYMSLERLDLPELFIWNGTRPHWRSGPWNDRTFTGLPVMNVMNSQYNNGANIVTEMDGTVYYILNLQNGSDFKGFGVLNSKGNLLYKRWDDAKKKWQETKVAPQSDCDIYGICGPFGSCNSRSSPICNCLRGFEPSSREEWNRQKWDGGCVRRTALQCGRVKTGTGDGNKDGFFHLQNIKLPDFGKCGYMSPEYAMEGLFSEKSDVFSFGVLMLEIVAGRRNSSFYNDENSLSLLGFAWKSWNEENLVPLIDPEIFDPYLKEGILRCIHIGLLCVQDLARERPSMSTIISMLNSEIVNLPNPRQPAFIQWQSIFSSMPHEQSHGLFSNNNVSITEINGR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0888 480 Pfam D-mannose binding lectin 66 132 IPR001480 -
Lele33g0888 480 SUPERFAMILY Protein kinase-like (PK-like) 319 463 IPR011009 -
Lele33g0888 480 SMART blect_4 33 106 IPR001480 -
Lele33g0888 480 Gene3D - 23 243 IPR036426 -
Lele33g0888 480 Gene3D Transferase(Phosphotransferase) domain 1 293 447 - -
Lele33g0888 480 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 329 424 - -
Lele33g0888 480 Pfam S-locus glycoprotein domain 164 277 IPR000858 GO:0048544
Lele33g0888 480 Pfam Protein tyrosine and serine/threonine kinase 329 431 IPR001245 GO:0004672|GO:0006468
Lele33g0888 480 ProSiteProfiles Bulb-type lectin domain profile. 27 140 IPR001480 -
Lele33g0888 480 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 170 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0888 Lele-ChrLele33 8999539 9003034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0888 329 463 Receptor kinase-like Gene Family AT4G23140 50.000 3.83e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0888 S_locus_glycop 1.5e-28 No_clan