Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0871 ATGGTTTCTAGGTCGTATTCTAACTTGTTAGAGCTTACTTCCTGCGATTCCCCAACTTTTGGTCGGGAGAAGAAGAGGCTTCCTCGAGTGGCAACTGTTGCTGGAGTACTTTCAGAACTAGATGATGAGAACAACAGTGCTGGCTCTGATGCTCCCTCATCCATATCTCAAGATTGGATGATTATTGTTGGTAACCAGCTTCCTTTGCAAGCTCGCAGAAAAGATGATGGTAAGTGGGACTTTACCTTGGACGAGGACTCTCTTCTTTTACAGCTGAAAGATGGCCTAGGAGATGATGTAGAAGTGATATATATTGGGTGTCTTAAAGAAGAAATTGATGTAAGTGAGCAGGATGATGTTGCTCAGTATTTGCTTGACACTTTTAAATGTGTACCCACGTTCCTACCTCCTGAACTTTTCAGCAAATTCTATCATGGGTTCTGCAAACAGCACCTATGGCCTTTATTTCACTATATGCTTCCACTGTCACCTGATCTTGGTGGTCGATTCGATCGGTCTCTTTGGCAAGCTTATGTTTCTGTGAATAAGATATTTGCAGATAAAGTAATGGAAGTCATTAGCCCTGATGATGACTTTGTGTGGGTTCATGACTACCATTTGATGGTTCTGCCGACATTTTTGAGGAAGAGATTTAACAGGGTGAGGCTAGGATTCTTCCTCCACAGTCCATTCCCTTCCTCTGAGATTTACCGAACACTTCCTGTAAGGGATGAACTTCTTAGAGCTCTTCTGAACTCTGACCTTATTGGGTTTCATACTTTTGATTATGCAAGGCACTTTCTCTCATGTTGTAGTAGAATGCTCGGGCTTTCTTATCAATCCAAGCGGGGCTACATAGGCCTTGAGTACTATGGCAGAACTGTTAGTATCAAGATTCTTCCTGTTGGAATCCATATTGGCCAACTTCAATCTGTCATGAATCTTCCTGAGACAGAGAGTAAGGTCTCAGAATTACGAGACCAGTTTACAGGTCAAACTGTGATGCTTGGGGTCGATGACATGGATATCTTCAAAGGAATTAGCTTAAAACTCTTGGCCATGGAGCAATTGCTCTACCAACATCCAGATAAGAGGGGACAAGTTGTTATGGTCCAAATTGCAAATCCTGCAAGAGGACGGGGGAAGGATGTGCAGGAGGTGCAAAGTGAAACTGATGCCACCGTAAAAAGGATTAATGATACATTTGGAAGGCCTGGATACACTCCTGTGATCTTGATTGACACGCCACTTAAATTCTATGAGCGAATAGCTTATTATGTAATTGCAGAATGTTGTCTGGTTACTGCAGTGAGAGATGGTATGAACCTTATACCCTATGAATATGTCATATGCCGACAAGGAAATGAGAAACTAGACGAGATTCTGGGGATAAATCCATTTTCTCAAAAGAAGAGCATGCTGGTGGTATCTGAATTCATTGGGTGCTCCCCTTCATTAAGTGGGGCAATTCGAGTGAATCCATGGAACATTGATGCTGTTGCCGAAGCTATGGATTCTGCCCTTGTAATCCCGGAGTCTGAAAAACAAATGCGACATGAGAAACATTATAGGTATGTTAGTACACATGATGTTGCATATTGGGCACGTAGCTTCTTGCAGGATTTGGAAAGAGCATGTAGGGACCATCTTAGAAGGAGGTGCTGGGGCATTGGTTTCGGCCTAGGATTTCGGGTAATTGCTTTAGATCCAAATTTCAGAAAGCTATCAGTTGAGCATATTGTTTCGGCTTACAAGAGGACCAAGCGCCGGGCAATTCTTTTGGATTATGATGGTACCATGATGCAGCCAGGAACAATTAGTACAAACCCAAGTGCTGATGCTGTAGGAATCTTGAAGAGCCTATGCAGCGACCCTGATAATATTGTTTTCATTGTTAGTGGGAAGGAGAGGAAGACTCTGACTGATTGGTTTTCTTCATGTGAAAGGCTAGGGATTGCTGCTGAACATGGTTACTTTTTGAGGACAAGTAACGCTGCAGAATGGGACACTTGTCTCTCTGTACCAGATTTTGACTGGAAACAGATTGCTGAGCCAGTAATGCAATTATACACAGAAACAACAGATGGTTCTAACATTGAGGCCAAAGAGAGTGCTTTAGTTTGGAATTACCAGGATGCAGACCGTGATTTCGGTTCATGTCAGGCTAAGGAGCTTCTAGACCACCTGGAAAGTGTACTTGCCAATGAACCTGTTTCCGTTAAAAGTGGCCCGCATATCGTGGAAGTTAAACCCCAGGGTGTCAACAAGGGAATTGTAGCAGAACGTCTTCTGATAACAATGCGTGAAAGGGGAGTAATTCCAGATTTTGTTCTATGCATTGGGGACGACAGATCAGATGAAGACATGTTTGAAGTAATCATGAGTGCGAGGGATTCTCTGTCACCAGTTGCCGAGGTGTTCGCTTGCACCGTGGGGCAGAAACCAAGCAAGGCCAAGTATTACTTGGAAGACACAAGTGAGATATTGAGAATGTTACAAGGCCTCGCCCATGCTTCAGAGCATTCTGCTAAAAGTCCTTCCCAACCTTCACCACGCAGAGCATTTTCCTGA 2571 0.4349 MVSRSYSNLLELTSCDSPTFGREKKRLPRVATVAGVLSELDDENNSAGSDAPSSISQDWMIIVGNQLPLQARRKDDGKWDFTLDEDSLLLQLKDGLGDDVEVIYIGCLKEEIDVSEQDDVAQYLLDTFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMNLPETESKVSELRDQFTGQTVMLGVDDMDIFKGISLKLLAMEQLLYQHPDKRGQVVMVQIANPARGRGKDVQEVQSETDATVKRINDTFGRPGYTPVILIDTPLKFYERIAYYVIAECCLVTAVRDGMNLIPYEYVICRQGNEKLDEILGINPFSQKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALVIPESEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKRRAILLDYDGTMMQPGTISTNPSADAVGILKSLCSDPDNIVFIVSGKERKTLTDWFSSCERLGIAAEHGYFLRTSNAAEWDTCLSVPDFDWKQIAEPVMQLYTETTDGSNIEAKESALVWNYQDADRDFGSCQAKELLDHLESVLANEPVSVKSGPHIVEVKPQGVNKGIVAERLLITMRERGVIPDFVLCIGDDRSDEDMFEVIMSARDSLSPVAEVFACTVGQKPSKAKYYLEDTSEILRMLQGLAHASEHSAKSPSQPSPRRAFS 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0871 856 Gene3D Glycogen Phosphorylase B; 53 310 - -
Lele33g0871 856 Gene3D - 589 707 IPR023214 -
Lele33g0871 856 Gene3D - 715 848 IPR023214 -
Lele33g0871 856 TIGRFAM T6PP: trehalose-phosphatase 588 836 IPR003337 GO:0003824|GO:0005992
Lele33g0871 856 Gene3D Glycogen Phosphorylase B; 311 527 - -
Lele33g0871 856 CDD HAD_TPP 591 827 - -
Lele33g0871 856 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 46 837 IPR001830 GO:0003824|GO:0005992
Lele33g0871 856 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 310 - -
Lele33g0871 856 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 719 848 - -
Lele33g0871 856 Pfam Glycosyltransferase family 20 61 543 IPR001830 GO:0003824|GO:0005992
Lele33g0871 856 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 794 IPR006379 -
Lele33g0871 856 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 547 - -
Lele33g0871 856 CDD GT20_TPS 61 543 IPR001830 GO:0003824|GO:0005992
Lele33g0871 856 FunFam Alpha,alpha-trehalose-phosphate synthase 312 527 - -
Lele33g0871 856 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 589 706 - -
Lele33g0871 856 Pfam Trehalose-phosphatase 593 826 IPR003337 GO:0003824|GO:0005992
Lele33g0871 856 SUPERFAMILY HAD-like 590 836 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0871 Lele-ChrLele33 8493963 8498562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0871 1 836 Trehalose Biosynthesis Gene Families AT4G17770 79.643 0.0 1437