Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0856 ATGAAGATAACAAATGGGATCGTTCTTAGCTGTTTTATATTATTCTCTTACTGCTACTTGTTTTGTGCAGCTTCTGACGCCATAACCATTGGCAAACCCATTAGCGATGGAGAACTTCTTCGTTCTGAAGGAAGAAAGTTTGCTCTTGGGTTCTTTACTCCTGGAAAATCTAGCTCTCGCTATGTTGGAATCTGGTACTATAACTTGCCAAAGCAAACTGTTGTTTGGGTTGCAAACAGAGACAATCCCATCAATGGCACCTCTGGAGTTCTCTCCCTCAGCACAGATGGGAATCTTATACTCTACCACAGTAACACCAACTTCCCCATCTGGTCCACGAATGTTTCTGTCACTGTTCCAAGTACCAGAGTTATGGCTCAACTCTCTGATGCAGGTAATCTTGCTCTAATTCAAAATGACTCCAAAGCTGTGTTCTGGCAAAGTTTTGATCATCCCACCGACACTTTTCTTCCATATGCCAAACTGGGTTTCAACAAAAGAACTGGTCAAAACTGGTTCTTGCACTCATGGAAGACAGATGATGATCCTGCAACAGGAAGTGTCTCAGCTAGGTTCAATACTTCCGGCAAAGCTCAGTTGTTTCTGTACAATCAACATACTCCATTGTGGCGAGTTGGATCCTTCAATGGAGAAATATTCGTGGGTTTCGCAGCTTTGAAACGATTAATGTTGTATACTTTCAATATCTCTGTTATGGAAGATGATAATGAGTTTACAGTCATGTATCATGCCTTGGACAACACCTCCATATTCAAGATTGTAGCTATTCCATCAGGATCCTTGCAAACGCATATATGGGATTACGATAAGAAAGATTGGAAGCGGTACGGGTCTTACCCAGAAGTGGACTGTGACACATATGGAACTTGCGGATCCAATAGTGACTGTGACTCTTACAACTATGCATACCACAAGTGTTCTTGTCTACCCGGGTTTGAACCCAGAAACGAAAGGTATGGGAAGAATGATCAATCAGTAGGTTGTGTGAGGAAGAAAGGACCGCCCTTGTGCAGAAATGGAGAAGGCTTCGTTAAAGTAGAAAGCGTCAAGATTCCTGATACATCTACAGCAAATGTTAGAAAGGGTTTGAGGATGGAGGAATGTGAACAAGAGTGCCTGAGAAACTGTTCTTGCACTGCCTATGCTGCGGCAGATGTGAGAAATGGAGGAAGTGGGTGTTTAACATGGCATGGGACTCTGGTGGACACAATGGTATTAAATGATGAAGGCCATGATTTATATGTTCGTGTTGATGCCATTGAACTAGCAAATTATAAGAGGAAATCAAAAGGAACACTTTCTGTCTCTGGAATGGTGGGAATTCTGACGGCTACTATTGTTGTGATTATTCTTCTGATTGCATTGTGTGTTTATTGCTTTTGGATTAAGAAAAAGAGAGACAAAATGACTGATCAACAAATAATCATAGAATCTCCCTCAGAAGAAGAGTATGGTGAAAATAGAACCCAAGTAAGCTTACCATTTTACAACATTAAAATCATACAGGCTGCTACAAATGGCTTTTCTAGTGAGAATGAGTTAGGCCATGGTGGATTTGGCTCTGTCTACAAGGGCTTATTAGTTGATGGACAAGAGGTAGCGGTGAAAAGATTGTCTAAAGGTTCAGGACAAGGGACTCAAGAGTTCAAGAATGAAATTAAACTGATTGCTAAATTGCAGCACAGGAATCTTGTAAGATTGCTTGGATATTGCATTCATAAAGAAGAAAGGATGTTGATCTATGAGTACCTTCCCAACAAAGGCTTGGACTTCTATCTTTTTGATATGAATAGAAGATCGTGTTTAGATTGGGATAAGCGTGTTCATATTATTTTAGGAATTGCTCGAGGTCTTCTTTATCTTCATCATGATTCAAGGTTGAAAATAATTCACCGGGACCTTAAAGCTAGCAATGTTCTCTTAGATGCTACAATGATCCCCAAAATTTCTGATTTTGGCATGGCTAGAATATTTGGAGAGGACCAAATTCATGCAAGAACAAGTAGAATTGTTGGAACATATGGTTATATGTCCCCAGAATACGCAATGGAAGGACAATATTCAATCAAGTCTGATGTCTTCAGCTTTGGTGTTCTTTTACTAGAGATTATTAGTGGGAGGAGAAACACAGATCGTGAAAAGGAAGGATCATCCCTGAATTTGATTGGACAAGTATGGGACTTGTGGGGAGAAGGAAAGGCCTTGGAAATAGTAGACTCAACACTTGGTGAATCATATCCTGTTGATGTTGTCTTAAGATATATCAAAATAGGGCTCTTGTGTGTGCAAGAAATAGCCGTCCAGAGGCCATCCATGTCGGACGTTATATTCATGCTTGGCAATGAAGTAAGCCTTCCCTCACCTCAGAAACCTGCATATCTGTTAAATTCTAATGATTTGTATTCAGAGACTTCAACATCTGGACAAGCTTCAGCTAATGTCCTCACTCAATCTACAATTGGTGGTCGATAA 2493 0.4039 MKITNGIVLSCFILFSYCYLFCAASDAITIGKPISDGELLRSEGRKFALGFFTPGKSSSRYVGIWYYNLPKQTVVWVANRDNPINGTSGVLSLSTDGNLILYHSNTNFPIWSTNVSVTVPSTRVMAQLSDAGNLALIQNDSKAVFWQSFDHPTDTFLPYAKLGFNKRTGQNWFLHSWKTDDDPATGSVSARFNTSGKAQLFLYNQHTPLWRVGSFNGEIFVGFAALKRLMLYTFNISVMEDDNEFTVMYHALDNTSIFKIVAIPSGSLQTHIWDYDKKDWKRYGSYPEVDCDTYGTCGSNSDCDSYNYAYHKCSCLPGFEPRNERYGKNDQSVGCVRKKGPPLCRNGEGFVKVESVKIPDTSTANVRKGLRMEECEQECLRNCSCTAYAAADVRNGGSGCLTWHGTLVDTMVLNDEGHDLYVRVDAIELANYKRKSKGTLSVSGMVGILTATIVVIILLIALCVYCFWIKKKRDKMTDQQIIIESPSEEEYGENRTQVSLPFYNIKIIQAATNGFSSENELGHGGFGSVYKGLLVDGQEVAVKRLSKGSGQGTQEFKNEIKLIAKLQHRNLVRLLGYCIHKEERMLIYEYLPNKGLDFYLFDMNRRSCLDWDKRVHIILGIARGLLYLHHDSRLKIIHRDLKASNVLLDATMIPKISDFGMARIFGEDQIHARTSRIVGTYGYMSPEYAMEGQYSIKSDVFSFGVLLLEIISGRRNTDREKEGSSLNLIGQVWDLWGEGKALEIVDSTLGESYPVDVVLRYIKIGLLCVQEIAVQRPSMSDVIFMLGNEVSLPSPQKPAYLLNSNDLYSETSTSGQASANVLTQSTIGGR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0856 830 Gene3D Transferase(Phosphotransferase) domain 1 591 794 - -
Lele33g0856 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 794 - -
Lele33g0856 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Lele33g0856 830 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Lele33g0856 830 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 778 - -
Lele33g0856 830 CDD PAN_AP_plant 345 424 - -
Lele33g0856 830 SMART serkin_6 515 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0856 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Lele33g0856 830 Pfam PAN-like domain 344 410 IPR003609 -
Lele33g0856 830 Gene3D - 20 149 IPR036426 -
Lele33g0856 830 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Lele33g0856 830 Pfam D-mannose binding lectin 73 178 IPR001480 -
Lele33g0856 830 Pfam Protein tyrosine and serine/threonine kinase 518 716 IPR001245 GO:0004672|GO:0006468
Lele33g0856 830 SMART blect_4 31 152 IPR001480 -
Lele33g0856 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Lele33g0856 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 480 590 - -
Lele33g0856 830 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Lele33g0856 830 SUPERFAMILY Protein kinase-like (PK-like) 499 810 IPR011009 -
Lele33g0856 830 PIRSF SRK 2 830 IPR024171 GO:0004674
Lele33g0856 830 ProSiteProfiles Protein kinase domain profile. 515 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0856 830 Gene3D Phosphorylase Kinase; domain 1 477 590 - -
Lele33g0856 830 Pfam S-locus glycoprotein domain 210 322 IPR000858 GO:0048544
Lele33g0856 830 CDD STKc_IRAK 521 786 - -
Lele33g0856 830 SMART ntp_6 345 424 IPR003609 -
Lele33g0856 830 CDD B_lectin 33 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0856 Lele-ChrLele33 8208113 8212302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0856 435 827 Receptor kinase-like Gene Family AT4G05200 50.508 1.86e-126 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0856 PK_Tyr_Ser-Thr 1.1e-47 CL0016