LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele33g0819	ATGATCAAACTCAAGCATCGTCCACTCTGCTTCCTCCCTCATCTTCTTCTTCTGATCTTCTCCTTCTCCGATTCATCTCTCGCCGTCGATTTCATCTTCAACGGGTTCGCCTCCTCCTCCGACGTCTTGCTCTACGGTAACGCCACCGTTGATTCTGGAATCCTGTCTCTAACTCATGACCAAGCTTTCTCTATCGGTCGTGCTCTTTATCCTCAGAAGATTCAAACGAAGAACCCAAATTCTTCGCATGTATACCCTTTTTCTACTTCCTTCATTTTCGCCATGGCACCTCATAAGAATATTCTTCCTGGCCATGGCCTTGTTTTCCTCTTCACGCCTGTTCGAGGAATCCAAGGTACAAGCTCTGCTCAAAATTTGGGTTTCTTGAACTTCACCAACAATGGCGATTCCGGCAACCACGTGCTCGGTGTTGAGTTCGATGTGTTTATGAATCAAGAGTTCGATGACATAAACGACAATCACGTTGGCGTCGATGTGAACTCTCTCAAATCTGTTTCATCTCACAACGCCGGGTACTGGCCGGATGACGTCAACGACAAGTCGTTTCAAGAATTGAGGCTAAACGATGGCGAGAATTACCAGGTTTGGATTGATTACGAAGATTCTTTGATTAACGTAACTATGGCGAGAGTAGGCACAAAACGACCACGGACGCCATTGTTGAATATGTCGTTGAACTTGTCTGAAGTTTTTGAAGATGAAATGTATGTAGGATTTACAAGTGCGACGGGGCAATTAGTTCAAAGTCATAAAATTCTTGCTTGGAGCTTCAGTAATTCAAAATTTTCACTTAGCGAAGCGTTAATCACTTCTGGGTTACCTTCTTTTGTTCTTCCCAAAGATTCAATCGTTAAATCCAGAGGATTCATCGCAGGATTAACCATTGGGATTTTCTTAATACTCTGTTTCATAGTTCTAGTGACTCTGTTTTTAATACAGAGAAAGCGAAGGAAAGCGAGGGAAAGAGAAGCAATGGAGGATTGGGAATTAGAATACTGGCCTCACAGAATAACATACGAAGAAATTGAATCAGCAACAAAAGGATTCTCGGAGGAAAACGTGATCGGAATAGGAGGAAACGGCAAGGTATACAGGGGAATCCTAGGAGGATCAGAAATAGCAGTGAAACGAATCTCCCATGAAAACAACGGAATGAGAGAATTTCTAGCAGAAATCTCCAGTCTGGGAAGACTCAAACACAGAAACCTGGTAAGATTACGAGGATGGTGCAAGAAAGACACAGGAGATTTCCTACTAATCTACGACTACATGGAAAATGGGAGCCTAGAAAACAGAGTATTTCAGAACGAGGAAGACGACAAGATCTTAAACTGTGAACAGAGGATTAGGGTTTTGAAGGATGTAGCTAGTGGGGTGATGTATTTGCACGAAGGGTGGGAAGAGAAAGTGGTGCATAGAGATATTAAAGCGAGCAACGTACTGTTGGATAAGGAGCTTAATGGAAGGTTGGGAGATTTTGGGTTAGCTTTAATGCATAACAATGGCGAAGTGGCAAGGACCACAAAAGTGATTGGGACGGTGGGGTACATGGCGCCTGAAATGGTGAAGACAGGAAGATCATCTACTCAGAGTGATGTTTACATGTTTGGAATCTTGGTTTTGGAGGTCATGTGTGGAAGGAGACCTATTGAGGAAGGAAAGCCATCTTTAGTGGAGTGGGTGTGGCAACTCAAAGCACAAGGACAACTAATAAATGCAATGGACGAGAGATTGAGGGCAAAAGGAGAAGTGAATGAACAAGAAGTAGAAACCATTCTTAACTTGGGATTGTTGTGTGCTTATCCTGATCCAAAAGCCAGGCCTACAATGAGGCAAGCCTTGAAGGTTTTAGAGGGAAAGAATAATAATAATAATATCGAAGATGGAGATTATGAAAAGGAAGATATGGATACCTATTTGCTTAAACGCATTACATCAGCAAGCGACTTGTGGTCTGAGTATTCTCATTACTTGAACTTCTCGTCTCACCCAACGTTTGAAGATGTTAGACTCACTACTATTTCTCATTCCTCCTCTACGTCTCGTGGCATTTCGTCTAACTCTGTTCTTGATAGCAGGTGA	2103	0.4275	MIKLKHRPLCFLPHLLLLIFSFSDSSLAVDFIFNGFASSSDVLLYGNATVDSGILSLTHDQAFSIGRALYPQKIQTKNPNSSHVYPFSTSFIFAMAPHKNILPGHGLVFLFTPVRGIQGTSSAQNLGFLNFTNNGDSGNHVLGVEFDVFMNQEFDDINDNHVGVDVNSLKSVSSHNAGYWPDDVNDKSFQELRLNDGENYQVWIDYEDSLINVTMARVGTKRPRTPLLNMSLNLSEVFEDEMYVGFTSATGQLVQSHKILAWSFSNSKFSLSEALITSGLPSFVLPKDSIVKSRGFIAGLTIGIFLILCFIVLVTLFLIQRKRRKAREREAMEDWELEYWPHRITYEEIESATKGFSEENVIGIGGNGKVYRGILGGSEIAVKRISHENNGMREFLAEISSLGRLKHRNLVRLRGWCKKDTGDFLLIYDYMENGSLENRVFQNEEDDKILNCEQRIRVLKDVASGVMYLHEGWEEKVVHRDIKASNVLLDKELNGRLGDFGLALMHNNGEVARTTKVIGTVGYMAPEMVKTGRSSTQSDVYMFGILVLEVMCGRRPIEEGKPSLVEWVWQLKAQGQLINAMDERLRAKGEVNEQEVETILNLGLLCAYPDPKARPTMRQALKVLEGKNNNNNIEDGDYEKEDMDTYLLKRITSASDLWSEYSHYLNFSSHPTFEDVRLTTISHSSSTSRGISSNSVLDSR	700

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele33g0819	700	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	318	430	-	-
	Lele33g0819	700	FunFam	L-type lectin-domain containing receptor kinase S.4	27	272	-	-
	Lele33g0819	700	Gene3D	-	28	274	-	-
	Lele33g0819	700	SUPERFAMILY	Protein kinase-like (PK-like)	333	628	IPR011009	-
	Lele33g0819	700	CDD	STKc_IRAK	362	626	-	-
	Lele33g0819	700	ProSitePatterns	Protein kinases ATP-binding region signature.	362	383	IPR017441	GO:0005524
	Lele33g0819	700	FunFam	L-type lectin-domain containing receptor kinase S.4	431	636	-	-
	Lele33g0819	700	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	477	489	IPR008271	GO:0004672\|GO:0006468
	Lele33g0819	700	SMART	serkin_6	356	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g0819	700	Gene3D	Transferase(Phosphotransferase) domain 1	431	659	-	-
	Lele33g0819	700	Gene3D	Phosphorylase Kinase; domain 1	317	430	-	-
	Lele33g0819	700	ProSiteProfiles	Protein kinase domain profile.	356	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g0819	700	CDD	lectin_legume_LecRK_Arcelin_ConA	29	267	IPR001220	GO:0030246
	Lele33g0819	700	PANTHER	-	49	628	-	-
	Lele33g0819	700	Pfam	Protein kinase domain	357	622	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele33g0819	700	SUPERFAMILY	Concanavalin A-like lectins/glucanases	28	269	IPR013320	-
	Lele33g0819	700	Pfam	Legume lectin domain	29	269	IPR001220	GO:0030246

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele33g0819	Lele-ChrLele33	7457570	7460774	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele33g0819	28	571	Receptor kinase-like Gene Family	AT4G04960	66.058	0.0	727

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Lele33g0819		Pkinase	7.2e-46	CL0016