Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0817 ATGGAGGAAAACCCTAGTTCATCATCATCCAGAACTGACAGAAAATTCATCGAGAGGAATCGCAGATATCAAATGAAGGCTCTCTACTCCAAGCTCAAATCTCTTGTGCCTCATCAAACTCCAACGGAGGCTATTCCATTACCTGATCAGTTAGAGGAAGCGACGAATTACATCAAGAAGTTACAGATGAAGTTGGAGAGAATTAAGGAGAAGAAGGAAAACCTAATTGCAATTAATAATCAACGGTCAAATTTGATCAAACATAAAAAAATGATTAAGAGATCATCCAAATCACCATGGTTTGAGATCAAAGAAGTGGGTACTACAGCCTTACAAGTTGTTCTGAGAACTGAGTTGGATAGTGAGTTTTCGTTCTCTGATATCATTCAACTTCTTCATGAAGAAGGAGCAAATATTGTTAATGCCAATTACACGGTTGTTGAAGATGTTGTTATTCATACAACACTCTGTGAGGTGGAGGAATCTGTCAACGTTGCTGCAATGATAACCGAAAGATTAAGGAGTTTCTAG 531 0.3804 MEENPSSSSSRTDRKFIERNRRYQMKALYSKLKSLVPHQTPTEAIPLPDQLEEATNYIKKLQMKLERIKEKKENLIAINNQRSNLIKHKKMIKRSSKSPWFEIKEVGTTALQVVLRTELDSEFSFSDIIQLLHEEGANIVNANYTVVEDVVIHTTLCEVEESVNVAAMITERLRSF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0817 176 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 174 IPR015660 -
Lele33g0817 176 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 61 IPR011598 GO:0046983
Lele33g0817 176 FunFam Transcription factor bHLH162 1 87 - -
Lele33g0817 176 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 76 IPR036638 GO:0046983
Lele33g0817 176 Pfam Helix-loop-helix DNA-binding domain 11 62 IPR011598 GO:0046983
Lele33g0817 176 Gene3D - 2 93 IPR036638 GO:0046983
Lele33g0817 176 Coils Coil 51 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0817 Lele-ChrLele33 7438313 7440841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0817 6 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 43.750 1.14e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele33g0817 HLH 7.1e-09 No_clan