Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0812 ATGAGTGCTCATTCAACTGGAGGGGAAGCTCCTCCAAGTCACCCAAGAAGGGAGGCTATTGATCTCAATAGGGATCCACCTGATATGATTCCTGAGCAAGCTTTCATTCATCAAGCTGTTCAGCAACCACCACAGTTTATTCAACAACCTATTGATGTGGAGGCTTTTGATGATGATGTCATACTTTCTACTCAAAGTGATTTTCTTGAGGCCAAAAACAACTCAATAAGGTATCGTGGGAGGACTGTAGTTGATACGGACTTATATGAATATGTTAATCGCAATCGGGCTGCAGAAATTACTCCCGGCAATCACAGAGGAGATACTTTGAACCAAACAATTCCTAATTCTGATCCATTTGTAATATTTGGCGCTGGTAGTTCTCAGCGAGCTGAACCTGCAAAAAATGAGCCAGTGTTTACCTGTCCAATATGTATGGAGCCATTTGTGGAAGAAGTGTCAACAAAGTGTGGTCATATTTTCTGTAGGGAATGCATTAAGGCTGCTATAAAGGCACAAGGCAAATGCCCTACTTGTAGGGTCAAGGTTACTGCAAAAGGCCTTATAAGGGTCTTTCTCCCAACAGCAACCTCTCCTTAG 600 0.4267 MSAHSTGGEAPPSHPRREAIDLNRDPPDMIPEQAFIHQAVQQPPQFIQQPIDVEAFDDDVILSTQSDFLEAKNNSIRYRGRTVVDTDLYEYVNRNRAAEITPGNHRGDTLNQTIPNSDPFVIFGAGSSQRAEPAKNEPVFTCPICMEPFVEEVSTKCGHIFCRECIKAAIKAQGKCPTCRVKVTAKGLIRVFLPTATSP 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0812 199 MobiDBLite consensus disorder prediction 1 29 - -
Lele33g0812 199 PANTHER ELFLESS, ISOFORM B 19 195 - -
Lele33g0812 199 Pfam Ring finger domain 141 180 IPR001841 -
Lele33g0812 199 ProSiteProfiles Zinc finger RING-type profile. 142 180 IPR001841 -
Lele33g0812 199 SUPERFAMILY RING/U-box 141 186 - -
Lele33g0812 199 SMART ring_2 142 179 IPR001841 -
Lele33g0812 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 196 IPR013083 -
Lele33g0812 199 ProSitePatterns Zinc finger RING-type signature. 157 166 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0812 Lele-ChrLele33 7387127 7391380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0812 16 195 C3H Transcription Factor Family AT3G07200 42.703 2.29e-34 118