Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0809 ATGAATGTTCATGAAGGTGGTGGTGGTGGTGGTGGTGGTGGAGGAGAGGTGAATAACCAAGTTCAGCTTCAGCCGCCACAGCCGCAGCCTCCACCGCCGCAGAGATGTCCTCGCTGTGATTCTGTGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCTCGCAGCCCCGGTACTTCTGTAAAACGTGTAAGAGGTACTGGACTCATGGTGGATCTCTGCGAAACATACCCATCGGTGGTGGTTGCCGGAAGGGAAAGCGAACCAAAGCGTCCTCGTCAGCTTCGTCATCATCCGCCGCCCTGCAGCTTGTGAGCCGGCCGCAACAGCTGCAACAGCCTCGGCTGCAAGAGGTGATCCCTACTCAACCGAACCTGATGATGTCGCCTCCACGCGTTCTTGTCGGTCGTTCTCCCGCGGCGAAGGCTTCACCACCGGAGGTTCCTTCGATCAGTTCCAACTATCAAGGTGGTGGGTATCTATCATCTCTGGCGGCGATTCACTCCCAAAACCCCTTATCACAACCATTATTCGATCTGTCCTCTCTGAATCTTGGTCCTTCCAATCTAGGTCTTCATCCTTGGTTCAATAATGCTCCTTCGACAACTCTGGCCTCAAAGCGCAATATTCCTTCGTCGTCATCGCCGGTGGTATTCCAATCGGCAAACAGAAGCAGGGACGTAGAATCTCTGTACGCGTCGGATCATCAAGGTGTGGTTCAAACGAGCATGATGATGATGAATATGGGTACTAGCAGTTTGGCTTCTCTTCATGATTGGTCTCAAAACTCTCTCTGGAGTACCGTAAGCCCAAGTTCCATTGGAGACAATTCTGAGAATACCGGTAACAATTATGACAATAGTAATGATCATAACGCTAAAGCCGGATCATCATCTTCTCTGAGTGGAAATCAATGGCCTGATGACCTACCAGGTTTTGGCCCTCCTCCATGA 954 0.5115 MNVHEGGGGGGGGGGEVNNQVQLQPPQPQPPPPQRCPRCDSVNTKFCYYNNYSLSQPRYFCKTCKRYWTHGGSLRNIPIGGGCRKGKRTKASSSASSSSAALQLVSRPQQLQQPRLQEVIPTQPNLMMSPPRVLVGRSPAAKASPPEVPSISSNYQGGGYLSSLAAIHSQNPLSQPLFDLSSLNLGPSNLGLHPWFNNAPSTTLASKRNIPSSSSPVVFQSANRSRDVESLYASDHQGVVQTSMMMMNMGTSSLASLHDWSQNSLWSTVSPSSIGDNSENTGNNYDNSNDHNAKAGSSSSLSGNQWPDDLPGFGPPP 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0809 317 ProSiteProfiles Zinc finger Dof-type profile. 34 88 IPR003851 GO:0003677|GO:0006355
Lele33g0809 317 MobiDBLite consensus disorder prediction 268 317 - -
Lele33g0809 317 MobiDBLite consensus disorder prediction 268 306 - -
Lele33g0809 317 MobiDBLite consensus disorder prediction 89 110 - -
Lele33g0809 317 Pfam Dof domain, zinc finger 34 88 IPR003851 GO:0003677|GO:0006355
Lele33g0809 317 MobiDBLite consensus disorder prediction 1 36 - -
Lele33g0809 317 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 241 IPR045174 GO:0003700|GO:0006355
Lele33g0809 317 MobiDBLite consensus disorder prediction 78 110 - -
Lele33g0809 317 ProSitePatterns Zinc finger Dof-type signature. 36 72 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0809 Lele-ChrLele33 7365101 7366054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0809 27 109 C2C2-Dof Transcription Factor Family AT5G60200 67.857 9.42e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele33g0809 zf-Dof 6e-32 No_clan