Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0776 ATGACGTGGTGCAATGAGTCATCAGATGAAGAGGAGCTTAATAATAATAATACAAAGGCGGTTCAGGTTATTAATTCTTCCTCCATTGTTGCCGCTCCTCTTCAAGCTTCTACAGATGATGAAGCCCTCGCAACAACAAAACCCTCTGAAATTCGAACTATTACTTGCCCTTCATGTGGCCATAACATTCAACTCCAAGATCAGGGAGGGATTCATGAGCTGCCAGGGCTACCAGCAGGAGTGAAGTTTGATCCAAATGATATAGAGATATTAGAGCATTTAGAGGCCAAGGTTTTGTCTGATGTTCGTAAGATTCATCCTCTCATTGATGAGTTCATTCCAACGCTTGAAGGTGAAAATGGAATCTGTTATACTCACCCACAAAAGCTTCCAGGTGTAAGCAAAGATGGACAAATCCGCCATTTCTTTCACAGACCATCAAAAGCATACACAACAGGAACAAGAAAGAGAAGAAAGGTTCACACAGACGAAGAAGGAAGCGAAACAAGGTGGCACAAAACAGGCAAAACAAGACCAGTCCAATGCAATGGTTCTGTCAAAGGTTTCAAGAAGATCCTCGTCCTCTACACCAACTATGGCAGACAGAAGAAACCAGAAAAGACAAACTGGGTTATGCATCAGTACCACCTCGGAACCGACGAGGAAGAGAGAGAGGGAGAATTAGTTGTCTCCAAGGTTTTCTTCCAGACGCAACCAAGACAATGTGGTTCCATTAATATGATGATGAAGGACCCTTATGACCATAAAAAAGGGATGACACTAAACAACAACAACAACAACAACAATAATATTCATGATGACAGTTCAGAACAAGCAGCTTTTGTGGATTATTACAGCAATCCTCCTCCTTACTTAAGTTATGAGCATTTAGGTCTTCATCATCATCATCATGGTAACTCTGAAAGCTCTCCCCAACTTATTCCCAACTTAGTTGTTCAAGGTGACCATGCTTCTTCTCCCTTTATTCGTCTGGCAATGGATCATTCCAACAAAGCAAGAATACTTGACCGAAAAATATAG 1041 0.415 MTWCNESSDEEELNNNNTKAVQVINSSSIVAAPLQASTDDEALATTKPSEIRTITCPSCGHNIQLQDQGGIHELPGLPAGVKFDPNDIEILEHLEAKVLSDVRKIHPLIDEFIPTLEGENGICYTHPQKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVQCNGSVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGTDEEEREGELVVSKVFFQTQPRQCGSINMMMKDPYDHKKGMTLNNNNNNNNNIHDDSSEQAAFVDYYSNPPPYLSYEHLGLHHHHHGNSESSPQLIPNLVVQGDHASSPFIRLAMDHSNKARILDRKI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0776 346 SUPERFAMILY NAC domain 72 236 IPR036093 GO:0003677|GO:0006355
Lele33g0776 346 MobiDBLite consensus disorder prediction 150 179 - -
Lele33g0776 346 Pfam No apical meristem (NAM) protein 78 217 IPR003441 GO:0003677|GO:0006355
Lele33g0776 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 34 264 IPR044799 GO:0003700
Lele33g0776 346 MobiDBLite consensus disorder prediction 156 175 - -
Lele33g0776 346 FunFam NAC domain-containing protein 73 86 240 - -
Lele33g0776 346 Gene3D NAC domain 87 240 IPR036093 GO:0003677|GO:0006355
Lele33g0776 346 ProSiteProfiles NAC domain profile. 77 236 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0776 Lele-ChrLele33 6991734 6995711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0776 1 336 NAC Transcription Factor Family AT1G28470 55.814 2.33e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele33g0776 NAM 4e-21 No_clan