Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0773 ATGTTGGTAGATTCGCTAACATTGTGTTGCGAGGGCTTGGTTCCTATGGGGGGTTTGATCGATCTCAATACTACGGAGGACGATGAAACGCCGTCGTCTCTTTCCTCGGCGGCTTCTTCTTCATCCTCTCACTCGGGTGCTGTAACTACTACTACTACTACTACTTCGGCCCCTTCTTCTTCTAACGCTGCTGTCTGCTTGGAGCTATGGCACGCATGTGCGGGTCCAACGATCTCGTTGCCCAAGAAAGGAAGCGTTGTTGTGTACTTCCCACAGGGCCACATGGAACAGCAGCTTCAGGATTTTGCGGTCGATGCCTGTAATATCAATTTCCCATCTCATGTTTTCTGTCGCATACTTGATATTAAGCTCCATGCGGAGGAAGGGAGCGATGAAGTGTATTGCCAGGTCTCGTTGGTTCCTGAGAGTGAGCAAGTGAAACAAAAACTGCCAGAAGGAGAACTTGATGCTGATGGTGAAGAGGAGGATGCTGATGCTGTGGTGAAGTCCATGACACCCCACATGTTCTGCAAGACTCTGACAGCTTCTGATACTAGCACTCATGGTGGATTTTCTGTGCCTCGTCGAGCTGCTGAAGATTGCTTCCCTCCCCTGGATTACACCCAACAGAGACCTTCACAGGAGCTTGTGGCAAAGGATCTGCATGGCCTGGAATGGAGGTTCCGACATATTTACAGAGGTCAACCAAGGAGGCATTTGCTCACAACTGGATGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTCTTGTTTCTTCGGGGCGGGGATGGAGAACTGAGATTGGGAATTCGTAGGGCTGCTCAATTAAAAAGTTGTAGTACTTCATCGGTGCCATCTGCTCATCAGTTGAATCCTAGCACTCTCATGGATGTGATTAATGCTTTATCCACAAAATGTGCCTTTAATGTGTATTATAATCCCAGGGTTAACTCATCAGGATTCATAATATCCCTTCACAAATTCTTGAAGAGCCTTGATCATTCATATTTGGTTGGAACGAGGTTTAGGATGCGTGTTGAAACTGATGAAACTACAGAGAGAAGGTGCACTGGATTAATTGTTGGAATGAGTGATGCAGATCCTATTAAGTGGCCGGGATCAAAATGGAAATGCCTGGCGGTCAGGTGGGATGACATGGAAGCCCCTAGGCATAATAGGGTTTCGCCTTGGGAGATTGAACCATCTAGTTCTGTTCCCACTTCCAATAATTTCATGGCTTCTAGTTTCAAGAGGAATAGGATTTGTCTGCCTTCAGAAAAGGCTGAATTACCAGTCCTGAATAGGATTGGAGGATCAGACTTCGGGGAATCATTGAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATATTGGGCATTAATACCCCATATGTTGGTATCAATGCTCAGAGTCACCAATTGTCTGAAAGTAGGTGCTATCCTGGGTCAAACTGTTCCAGAATTGTAGCAGCAGCAAATAATGTCAGTGTCCCACAGGTGAGTTCTGACATGTCATGCCGTGGCATAGGCTTTAGTGAATCTTCAAGATTCAAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATACAGAACCTTGTCTGTTAATGAGGCTCATAGAAATGGTTGCTTTGGAATCTTTGATGGTTGTCAATTGCTGGGGTCCAGAAATCAATGGTCTACCCAGATGCGGGACAATTCTTCCCATATACATCCATCTAGACTGGTTTCAACCCCATCATCTGTTCTGATGTTCCAACAAGCAGCCAATTCAGTTTCCAACTTTGATTATGGGAGTAAAAGTAATCAAGAGATGGAGAGAAAAATGCACTACCTAGGTTCGTATGCTTCTGAAGTGAAGGGTAGAAAGTTAGCACAATCCCCATCTAATGAGCCTGGTTGCTGTGGGCAAGTTCAGGTAGGAACAAATTCGTTTGGTACGTCAAATTTTCATAATCATCTGGTCAAAGCAAGTTCAGATGATTCTCTTTGGTCATTGGCTGGTAGTCGAGAGTTGGTTTCCACATGTAAAAGTAGCTGCAGACTCTTTGGTTTTTCATTAACTGAGGAAAATCATATTGCCCATGAAGAAGCAGGCTCCTCTACAATCACTTGTCAATTAAATTCTGGACCTTCCTTAATAAGACATGTTGGGGATGAATTTCAGCTAGGGCATTCACTCAGGAGCAAGGCAGCTGGAAGCAACAATACCAAAGTAAGCAACCTTAATCTTGTATGA 2253 0.4483 MLVDSLTLCCEGLVPMGGLIDLNTTEDDETPSSLSSAASSSSSHSGAVTTTTTTTSAPSSSNAAVCLELWHACAGPTISLPKKGSVVVYFPQGHMEQQLQDFAVDACNINFPSHVFCRILDIKLHAEEGSDEVYCQVSLVPESEQVKQKLPEGELDADGEEEDADAVVKSMTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQLKSCSTSSVPSAHQLNPSTLMDVINALSTKCAFNVYYNPRVNSSGFIISLHKFLKSLDHSYLVGTRFRMRVETDETTERRCTGLIVGMSDADPIKWPGSKWKCLAVRWDDMEAPRHNRVSPWEIEPSSSVPTSNNFMASSFKRNRICLPSEKAELPVLNRIGGSDFGESLRFQKVLQGQEILGINTPYVGINAQSHQLSESRCYPGSNCSRIVAAANNVSVPQVSSDMSCRGIGFSESSRFKKVLQGQEILPSQPYRTLSVNEAHRNGCFGIFDGCQLLGSRNQWSTQMRDNSSHIHPSRLVSTPSSVLMFQQAANSVSNFDYGSKSNQEMERKMHYLGSYASEVKGRKLAQSPSNEPGCCGQVQVGTNSFGTSNFHNHLVKASSDDSLWSLAGSRELVSTCKSSCRLFGFSLTEENHIAHEEAGSSTITCQLNSGPSLIRHVGDEFQLGHSLRSKAAGSNNTKVSNLNLV 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0773 750 MobiDBLite consensus disorder prediction 25 59 - -
Lele33g0773 750 SUPERFAMILY DNA-binding pseudobarrel domain 170 282 IPR015300 -
Lele33g0773 750 CDD B3_DNA 174 276 IPR003340 GO:0003677
Lele33g0773 750 Gene3D - 340 413 - -
Lele33g0773 750 FunFam Auxin response factor 174 278 - -
Lele33g0773 750 Pfam Auxin response factor 303 383 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele33g0773 750 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 64 703 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele33g0773 750 FunFam Auxin response factor 339 410 - -
Lele33g0773 750 ProSiteProfiles B3 DNA-binding domain profile. 176 278 IPR003340 GO:0003677
Lele33g0773 750 SMART B3_2 176 278 IPR003340 GO:0003677
Lele33g0773 750 Pfam B3 DNA binding domain 176 277 IPR003340 GO:0003677
Lele33g0773 750 Gene3D - 174 278 IPR015300 -
Lele33g0773 750 MobiDBLite consensus disorder prediction 21 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0773 Lele-ChrLele33 6957636 6964516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0773 61 713 B3 DNA Binding Superfamily AT5G60450 40.862 7.83e-143 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele33g0773 B3 6.2e-22 CL0405