Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0771 ATGGGTTCAATTGAAGCCAAACCAGCAAGTGAGTTCTTTGAAGCTCAAGCTCACTTGTATAAACAGATTTTCAGCCACATTAATGGCACAGTTCTTAAATGTGCTGTTCAGTTAAGAATTCCAGACATAATCCACAGCCATGGACAACCCATTACTATTCCTCAATTAGCCTCCAATCTTGAAATTCACCCAACAAAAATTGCCTATGTGGAGAGGCTTGTTCGCTTACTGGTGCACAATGGCTTCTTAGCAGAAACCAAGGTGATGAATGTGGAAGAAGATGAGGCATACACTCTAACTCCATCTTCTAAACTACTCGTCAAAGGCATGGAACCTAACCTAGCTCCCATGGTGTTAGGGTTTGTGGACACTGGTTTCATGGCTTCGTTTGATTTTCTGGGAAGGTGGTTCAAAGGGGAGGAGAAGACGATAGTTGAAAGTGCCTTTGGGTTAGGGTTTTGGGACATGCTTGAACGTGATCATCAACGTATGAAGTCTTTTAATGAGGCAATGGCAAGCACCACTTGTAGGATCATCTCTGAGAGATATCCTCATCTGAAGTGCATTGTGTTTGATCTTCCACAAGTTGTTGAAAACTCTTTAGGAAGCAATAACTTGAGTTTTGTTGGTGGCAGCATGTTTGAATCCATCCCTTCTGCTGATGCTGCTTTGTTGAAGTGGATATTACATAATTGGGATGATGAAAACTGCATAAAGATACTAAACAAATGTATGGAGGCAATCTCAAGAAAGGTGAAGGAGGAGGAAAGGAGTTCTCATCAAATTGAGGGAGAGAAGTTATATCGAAGGAAAGAAATTTTTGGTCATATTGATAGTACCTCAATACCTCAGAAGGATCATGACATTCTGACTCCTGAAGAAAACATGTGTAACAAAGACCCTTCACCTATATCAAGGGTATTACAAGGTAATTGCATTGATGATATTGAGACTAAAGCATGTGATGATGCATATGTGAAGGAGGTTGGGCCAAACTATGCTGAAGAGTTTACGCCCATTATCAAGATAAATAGCCACATTAAAGGCAGAGTTCTTAAGTGTTCTGTTCAGTTAAAAATTCCAGACATAATCCACAACTATGGCCAACCCATTTCTATTCCTGAATTAGCTTCCAATCTTGAACTTTACCAAACAAAAATTGCCTCTGTTGAGAGGCTTTCTCGCTTACTGGTGCACAATGGCTTCTTAGCAGAAACCAAGGTGATGAACGAGGAAGAAGAAGGAATGGAAGAAACTACTTCTCGCGGCTGGCTTCAAACGTCACAAGCTTACTCCTCTTTTTGGCTTTAA 1311 0.4066 MGSIEAKPASEFFEAQAHLYKQIFSHINGTVLKCAVQLRIPDIIHSHGQPITIPQLASNLEIHPTKIAYVERLVRLLVHNGFLAETKVMNVEEDEAYTLTPSSKLLVKGMEPNLAPMVLGFVDTGFMASFDFLGRWFKGEEKTIVESAFGLGFWDMLERDHQRMKSFNEAMASTTCRIISERYPHLKCIVFDLPQVVENSLGSNNLSFVGGSMFESIPSADAALLKWILHNWDDENCIKILNKCMEAISRKVKEEERSSHQIEGEKLYRRKEIFGHIDSTSIPQKDHDILTPEENMCNKDPSPISRVLQGNCIDDIETKACDDAYVKEVGPNYAEEFTPIIKINSHIKGRVLKCSVQLKIPDIIHNYGQPISIPELASNLELYQTKIASVERLSRLLVHNGFLAETKVMNEEEEGMEETTSRGWLQTSQAYSSFWL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0771 436 Pfam Dimerisation domain 351 398 IPR012967 GO:0046983
Lele33g0771 436 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Lele33g0771 436 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 248 IPR029063 -
Lele33g0771 436 Gene3D Vaccinia Virus protein VP39 108 256 IPR029063 -
Lele33g0771 436 SUPERFAMILY "Winged helix" DNA-binding domain 343 406 IPR036390 -
Lele33g0771 436 Gene3D - 339 425 IPR036388 -
Lele33g0771 436 Gene3D - 2 106 IPR036388 -
Lele33g0771 436 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 339 IPR016461 GO:0008168
Lele33g0771 436 Pfam O-methyltransferase domain 177 249 IPR001077 GO:0008171
Lele33g0771 436 PANTHER O-METHYLTRANSFERASE 350 413 IPR016461 GO:0008168
Lele33g0771 436 SUPERFAMILY "Winged helix" DNA-binding domain 10 109 IPR036390 -
Lele33g0771 436 FunFam Coniferyl alcohol 9-O-methyltransferase 3 106 - -
Lele33g0771 436 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 340 436 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0771 Lele-ChrLele33 6926812 6934397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0771 32 253 Monolignol Biosynthesis Gene Families AT5G54160 27.203 2.74e-23 99.0