LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele33g0759	ATGGCTTCTTCTAACAGACACTGGCCTAGCATGTTCAAATCCAAGCCCTGCAATCCCCACCACCCATGGCAGCACGACATGAACTCCTCCACTCTCATCTCTTCTTCAACCTGCCACCGAACCCCATACCCTTCTTCTTCTTCCTCAGGGATGGTGAATCCTCCGAGAGATGAGATCCGAAAGATAAGAGCTCAGCTTCAGGAGTATGGTCAAGTTGGTGACGCTAATGTCTTCTACTGGTTTCAGAATCGCAAGTCCAGAAGCAAACACAAGCTTCGTAACCTCCAAAACAACAAGAACACTAACACAAAAGAATCAACAACCACCCCACCACCACTTTCTCAGATAATTTCACCTTCTTCTAATTCTTCTTCATCTGATAATAACAACAAATCTTCCCCTTCTCCATCTTCTCCTTCTTCCAAGGAAATCATCAGTATTATCCCTCCTTTCAAGTCGTCTTCTTCATCATTCTCCATTAATGGCTTCTCTTCTGATGTTATCCTCCCAAGTTCTGTGAGTTTTCAGAATAATACCCATCATGAGACCTCTCTTTCTGAGCCTTTCTTCTTCCCTGTTACTGCTTCTTGTCCTTCTCCTTCTTCTGCTACAACTCATCATCATCAAGGGTTTTGCTTCTCTGAGCTCTCTGGTCTTGTTCAATCTCATCAACACGTTGTTGGGCCTTGCACTAGTCTGTTGCTCAGTGAGATGATGAATGAGAAGAAAGAACAAGATCATCATAATAATAAGGATCATATGAAGAGTACTATAATGAATAATCATCATCATCATCATCTGAGTTTTTGTGTGGCAGCTTCGTCTTCTTCCGTAACTCCCACCACCATTCACAGTACTGTTTTGCCTTCTATGGCTCCTTCTGCAACCACCACCAACACCACTGTTACTGTTCCATCCCTCGTCCCTCAGATTCAAGGAGAGGAGATAGGTGGTACGGCGGCCAAATCTATTGTATACATAAACGACGTCGCATTTGAGGTGGCTGTGGGTCCCTTCAACGTGCGGGAGGCTTTTGGTGAAGACGCGGTTCTGGTCCACGCGGCAACAGGACACCCCGTCCTAACCAACGAGTGGGGCGTCACCCTCCAGTCACTCCAGCACGGCGCATTTTATTATCTGGTGCTCACATATAGAAAGGAGAAAGTTGAAGGTGATATGTGGAGTTTTCTACGTACCTCTGTGGAGCATATGTTCTTAATTAGTTCTCTTTGTGTTTACATAATATTATATGTAGTGTGTGGTGATATTAGAATGTATTAG	1281	0.4442	MASSNRHWPSMFKSKPCNPHHPWQHDMNSSTLISSSTCHRTPYPSSSSSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRNLQNNKNTNTKESTTTPPPLSQIISPSSNSSSSDNNNKSSPSPSSPSSKEIISIIPPFKSSSSSFSINGFSSDVILPSSVSFQNNTHHETSLSEPFFFPVTASCPSPSSATTHHHQGFCFSELSGLVQSHQHVVGPCTSLLLSEMMNEKKEQDHHNNKDHMKSTIMNNHHHHHLSFCVAASSSSVTPTTIHSTVLPSMAPSATTTNTTVTVPSLVPQIQGEEIGGTAAKSIVYINDVAFEVAVGPFNVREAFGEDAVLVHAATGHPVLTNEWGVTLQSLQHGAFYYLVLTYRKEKVEGDMWSFLRTSVEHMFLISSLCVYIILYVVCGDIRMY	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele33g0759	426	SUPERFAMILY	Homeodomain-like	53	93	IPR009057	-
	Lele33g0759	426	Pfam	Homeodomain	53	90	IPR001356	GO:0003677
	Lele33g0759	426	PANTHER	WUSCHEL-RELATED HOMEOBOX 9	1	45	IPR044557	GO:0003700\|GO:0050793
	Lele33g0759	426	MobiDBLite	consensus disorder prediction	33	55	-	-
	Lele33g0759	426	MobiDBLite	consensus disorder prediction	95	143	-	-
	Lele33g0759	426	MobiDBLite	consensus disorder prediction	33	53	-	-
	Lele33g0759	426	MobiDBLite	consensus disorder prediction	89	143	-	-
	Lele33g0759	426	CDD	homeodomain	39	91	IPR001356	GO:0003677

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele33g0759	Lele-ChrLele33	6799841	6802545	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele33g0759	1	97	Wox Gene Family	AT2G33880	63.115	1.64e-37	139

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HB-WOX	Lele33g0759		Homeodomain	2.7e-06	CL0123