Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0757 ATGGCGTCATCGTCTTCCCAAACAGAGCTTCTTCCTCTTAACCAGGATGATTCTCAAGACATGGTCATCTACCATGTCCTCTCCGAAGCCAACGCTCTTCCACCTTCTTCTTCTGCACCAGTCCTTGGCCTCCATCAGGTCACCACCAGGACCGTCAAGAAGCACTATCGGGGAGTGAGGCGGCGCCCATGGGGCAAGTACGCGGCGGAGATCCGGGACTCGGCTCGCCACGGGGCTAGGGTTTGGCTGGGGACGTTTGAGACCGCAGAAGAGGCCGCCTTGGCTTATGACAGAGCTGCTTTCAGAATGAGAGGTTCTAAGGCTCTTCTTAATTTCCCACCTGACCTTGTAGCTCCTCCTCCTCCTTCTATTTCAAGCCCAGAAAGATTGAATAACAAGGCTTCTTCTGATTCTGATTCAAGTGTTGTAAGTTCTGTTGAGAGTCGTAGTTGA 453 0.5254 MASSSSQTELLPLNQDDSQDMVIYHVLSEANALPPSSSAPVLGLHQVTTRTVKKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGSKALLNFPPDLVAPPPPSISSPERLNNKASSDSDSSVVSSVESRS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0757 150 ProSiteProfiles AP2/ERF domain profile. 55 113 IPR001471 GO:0003700|GO:0006355
Lele33g0757 150 MobiDBLite consensus disorder prediction 112 150 - -
Lele33g0757 150 FunFam Ethylene-responsive transcription factor 2 54 114 - -
Lele33g0757 150 SMART rav1_2 55 119 IPR001471 GO:0003700|GO:0006355
Lele33g0757 150 CDD AP2 54 112 IPR001471 GO:0003700|GO:0006355
Lele33g0757 150 Gene3D AP2/ERF domain 54 114 IPR036955 GO:0003700|GO:0006355
Lele33g0757 150 Pfam AP2 domain 55 105 IPR001471 GO:0003700|GO:0006355
Lele33g0757 150 PRINTS Ethylene responsive element binding protein signature 79 95 IPR001471 GO:0003700|GO:0006355
Lele33g0757 150 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Lele33g0757 150 MobiDBLite consensus disorder prediction 127 150 - -
Lele33g0757 150 SUPERFAMILY DNA-binding domain 55 114 IPR016177 GO:0003677
Lele33g0757 150 PANTHER DNA-BINDING DOMAIN 49 133 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0757 Lele-ChrLele33 6784849 6785301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0757 11 139 AP2-EREBP Transcription Factor Family AT3G23240 46.622 5.92e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele33g0757 AP2 9.3e-16 CL0081