Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0747 ATGACTGTTCCTGAAGCACTTCCTAGATCTCGCCTATTCTTTCTTCTGCTCATCTCATCTTTTTTCTTTCATGTCTATGGAGATGAGGACACGAAAGTTATACGTATTGGATCAATTATTGATGTTAACTCTCGTATTGGTAAAGAACAGCAAATAGCCATGGAAATTGGAGCTCAAAACTACAATAACACATCAAAGACTCACAAGCTGTCTCTTTATTTCCGGAATGCCTCTAAGGAAGCCTTCAGAGTTGCGTCTCTTGCTGAAGAGTTAATTGAAATGCAGAAAGTACAAGTAATTATAGGGATGCATACATGGCAAGAAGCAACTCTAGTGGCTGAAGTTGGAAGCCAACCTCAAGTTCCAATCATATCCTTTGTATCACCTCCAATAACCCCACCTTTGGCACAAAAACGCTGGCCTTATCTGGTTAGACTAGCTAACAATGTCACTGCACAGGTAAAATGCATTGCAGATATAGTGAATGCTTTTAGTTGGCAAAGAGTAGTAGTAGTTTATGAAGACGATGGCTATGTTGGTGGGGACTATGGGATGCTCTCTCTCCTTTCTGAGGCTCTTCAAGACTTTGGTTCACTAATTGAATACCGTTTAGCGCTCCCACCAATTTCTTTTCTGCCGGATCCAGTAGAGCTAATCAATGAAGAGCTGATTAAGTTGGTAAAGCAAACTCAATCTCGTGTTTTCGTTGTTTTGCACTCATCCTTAGATATGATGACTCATTTGTTCAGAGAAGGTTCAAAGATGGGACTTGTGGATAAAGATTCAGCTTGGATAATCTCAGAGAGCATAACTAATTTGCTTGACTCTGTGGATAAGTCTGTTATTTCCACCTATATGGGAGGGACCTTAGGAATCAAGACGCATTACTCAGAAAATAGCAGTGAGTACCAAGATTTTCAAGCTCAGTTCCGGAAAAAGTTTCGTGCAAAGAATCCTGAGGAAGACAATATCAACCCAGGATTTTATGCTTTGCAAGCATATGATAGCATCAAAGTTGTCATTGAAGCAGTAGAAAGAATGGAAAGGGACAAAAGTAGCAGCCCAAAAGCATTGCTAAGAGAAGTATTGTCTAGCAGTTTCAATGGTTTAAGTGGGGAAATTCATTTCCAAGCAGGCCAGCTCTTGCAGAATCCTAACCTAAGGATAGTTAATGTAGTTGGGAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAACGGGTTCACCACAAGCCTTCCTACAGGAAAAAGTGAAGAAAATGCTACTGCTAACACACAAAGTTTGGTTGGTGTAGTACAATGGCCAGGGAATTTGCATAGAACTCCAAAAGGTTGGAATATGCCTGTTAAGAAAAAGCCAATGAAAATTGCAGTTCCTGGAAGAACGTCATTTTCAAAGTTTGTCAAGGTTGACTATGGAAAAAGTCGAGATCAGAACAAATATCACGGATTCTGTATTGAGGTTTTCAACAAGACTCTTGAGCTTTTGGAATATGATCTACCCTATGAGTTTTATCCCCTCAATGTAACTTATCCTGATCTGGTTCAACTTGTGTATAACAAGACTTATGATGCTGTGGTTGGTGACATGACCCTACTAGCAGAGAGACTGCAATATGTGGATTTTACTGTGCCATATGAAGAATCGGGATTGTCCATGGTAGTTTCAGTGAAGTCTCAAGATTCAGCATGGATGTTTCTAAAGCCATTCACCTGGCAAATGTGGGCGGTTGTTGGTACAACATTGATTTACACTATGTTAGTAGTTTGGTACCTAGAACGAGTACCTAATCCAGAGTTTCAAGGCAATTGGAATAGACAGTTTAGCACTGCTCTTTGGTTTACCTTCTCCTCCCTATTCTTTGCTCATAGGGAGCAAATGCATAGCAACTTATCTCGTGTGGTGATGGGAGTATGGCTTCTTCTAGTTATGGTTATGAGCTCAAGCTACACAGCTAGCCTTTCTTCAATGTTAACAGTTCAACTACTGCAGCCGAATGTCACAAGTATCGAGTGGCTGAAAATGAATAATATGAAAATTGGTTGTGATGGTGACTCATTTGTTAGGACATACCTAGAGAAAGTCGAAAAGTTCAAGCCAGAAAACATCATCAACATAAGCAGTGAATACAATTATGATGGTGTATTCAAAAACAACTCAATAGCAGCAGCTTTTCTCGAAGTCCCTTATGAAAAAGTATACATAAGTACTTACTGCAAGAAATATTCTGGCTCCACCCCAACCACCAGATTTGGGGGCCTAGGCTTTATGTTCCAAAAAGGATCCCCAGTGGCCAAAGATTTTTCTAAAGCAATATTGCAGCTTTCAGAGAAGGGAGAACTAACCAACTTGGAAGCAAAATGGTTATATCAGTCAAATGAATGCACTACCAGCTCAAGCTCCAATGGTACACAAAGTCTGAAGCTTGAAAGTTTCTGGGTTCTCTTTGTCATTTCTGGGATCACATCTACTATCTGTTTACTATTTTCTATCATTCAATCGCAAGGATTCTGTCAGCTAACTCAAAATATAGCTCAATTAGGAAATGGACCAACAAGTTATATGACAGTTTGGATAAGAACACTTGAATTAGCTAAGGGGATTTATAGCAGAAAGCTTATTCAGGAAACTCATTTGTACGGGCCCAATATTGGGGCTCAACAAGCTGTGACTGACTTTTCTTCCAGATGGGACTATGTAAGCACGACTGATTCACGTATGCATCAACAAGATACTGCAGCAACAGTCATTGTGCTCTCTTCACCACCACCAGATTCACAAATGGAAACCCCTGATAATAGATGA 2808 0.3989 MTVPEALPRSRLFFLLLISSFFFHVYGDEDTKVIRIGSIIDVNSRIGKEQQIAMEIGAQNYNNTSKTHKLSLYFRNASKEAFRVASLAEELIEMQKVQVIIGMHTWQEATLVAEVGSQPQVPIISFVSPPITPPLAQKRWPYLVRLANNVTAQVKCIADIVNAFSWQRVVVVYEDDGYVGGDYGMLSLLSEALQDFGSLIEYRLALPPISFLPDPVELINEELIKLVKQTQSRVFVVLHSSLDMMTHLFREGSKMGLVDKDSAWIISESITNLLDSVDKSVISTYMGGTLGIKTHYSENSSEYQDFQAQFRKKFRAKNPEEDNINPGFYALQAYDSIKVVIEAVERMERDKSSSPKALLREVLSSSFNGLSGEIHFQAGQLLQNPNLRIVNVVGKSYKEIDFWTQENGFTTSLPTGKSEENATANTQSLVGVVQWPGNLHRTPKGWNMPVKKKPMKIAVPGRTSFSKFVKVDYGKSRDQNKYHGFCIEVFNKTLELLEYDLPYEFYPLNVTYPDLVQLVYNKTYDAVVGDMTLLAERLQYVDFTVPYEESGLSMVVSVKSQDSAWMFLKPFTWQMWAVVGTTLIYTMLVVWYLERVPNPEFQGNWNRQFSTALWFTFSSLFFAHREQMHSNLSRVVMGVWLLLVMVMSSSYTASLSSMLTVQLLQPNVTSIEWLKMNNMKIGCDGDSFVRTYLEKVEKFKPENIINISSEYNYDGVFKNNSIAAAFLEVPYEKVYISTYCKKYSGSTPTTRFGGLGFMFQKGSPVAKDFSKAILQLSEKGELTNLEAKWLYQSNECTTSSSSNGTQSLKLESFWVLFVISGITSTICLLFSIIQSQGFCQLTQNIAQLGNGPTSYMTVWIRTLELAKGIYSRKLIQETHLYGPNIGAQQAVTDFSSRWDYVSTTDSRMHQQDTAATVIVLSSPPPDSQMETPDNR 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0747 935 Pfam Bacterial extracellular solute-binding proteins, family 3 478 790 IPR001638 -
Lele33g0747 935 SMART GluR_14 456 792 IPR001320 GO:0015276|GO:0016020
Lele33g0747 935 FunFam Glutamate receptor 450 564 - -
Lele33g0747 935 Gene3D - 149 407 - -
Lele33g0747 935 Gene3D - 448 563 - -
Lele33g0747 935 SUPERFAMILY Periplasmic binding protein-like I 32 446 IPR028082 -
Lele33g0747 935 CDD PBP1_GABAb_receptor_plant 35 413 IPR044440 -
Lele33g0747 935 PIRSF IGluLR_plant 6 862 IPR017103 -
Lele33g0747 935 Pfam Receptor family ligand binding region 61 393 IPR001828 -
Lele33g0747 935 Gene3D - 564 704 - -
Lele33g0747 935 Gene3D - 45 383 - -
Lele33g0747 935 FunFam Glutamate receptor 564 702 - -
Lele33g0747 935 SUPERFAMILY Periplasmic binding protein-like II 430 792 - -
Lele33g0747 935 Gene3D - 738 798 - -
Lele33g0747 935 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 833 - -
Lele33g0747 935 Pfam Ligand-gated ion channel 791 822 IPR001320 GO:0015276|GO:0016020
Lele33g0747 935 CDD GluR_Plant 453 790 - -
Lele33g0747 935 FunFam Glutamate receptor 153 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0747 Lele-ChrLele33 6703287 6707653 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0747 13 829 Ion Channels AT2G29120 33.097 5.55e-142 445