Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0709 ATGCCTTCTTCTTCTTCCTCTTGGACTGTCTCTTCCATAAACCTTCAATTCTTCACCCGAATCAGACGTTGTCTTCAATCCAAATCTTCTCGGAAACGCAACCACAGGTCTGATCAATTTCACGGATCAAAATCCAAATCACAAAGCAGCGACAAGAAGGATGAGAAGGCGGAGGTTGAAAAGCTTGAAACAATTAAGGTTATGCAGAAACAGAGTGAGAGTATTGAGGAGATGGAGGAGGAGGAGGAGAATTGTGAGATTTTGTTGAAGAGGTCTGTGAAGAAGCTTCACTTTGGTGATTGGGAGGAGAAGGAGATTGCAGCGAAAGAAATTGAAACTATGTTGAAACTCGATGTCAAGGCTCGCAAGTTGATCATGGAGCTCGGCGTAGTGCCGGTGCTAGTCTCTATGGTGGCTTCCGATGAATCCAGCCGCCGGAGTTCTGCCGTCACGGCTTTGATTCAGCTCGCCGATGGAAGCTTCACGAACAAGGCCATTATAGTAGAGGCAGGAATATTATCCAAGTTACCTCAGAGGATTGACCTTATGGACGAATCAACCAGTCAAATTGCAGAGTTGCTTCTGTCATTATCATCTTTATCAACCACACCATTCCCCTTTGCATCACTGGAATTTCTCCCATTTCTCAGAGACATTCTTCAGTCAAACTCAAGCTTTGGAACAAAACAGTTATGTCTAGGAGCCATGTTCAATCTCTCAACTGTCTTAGAGAATGCAGGGCCTTTGGTTTCTACTGGGTTTGTCCCTATTCTTCTAGAACTTTCCTCAGAGAAACAAGTTTCAGAGAAGGCACTGGCTTCTCTGGGGAACTTAATTGTTACATTAATGGGGAAGAAAGCAGTAGAAGAAAGCTCAATGGTACCAGAGAGCTTTATAGAGATTTTGTCATGGGAAGATAAGCCAAAATGTCAAGAGATTTCTGCTTACATTTTGATGATTCTTGCTCATCAAAGTTCATCACAGAGACAGAAAATGGCCAAAGCAGGGATTGTTCATGTGCTTCTTGAAGTGGTTTTATTGGGAAGCACTTTGGCTCAGAAGCGAGCTTCAAAACTGTTGCAATGGTTTAAGGATGAAAGGCAAGTTAGAATGGGCCCACACTCGGGCCCACAGACATCAAGAACAGCCTTGTCCATTGGTTCACCTATGAATCAAATGGAAGCAAGAGAAGGGAAGAGAATGATGAAGAATTTGGTCAAAGAGAGTTTACATAGGAATATGACAATAATTACAGAGAGGGCAAATATTGCTTCTGCAGAATCTTCTTCTAAGTTCAAGTCTTTAATAATCAGTACAAGTTCCAAGAGTTTGCCTTACTGA 1341 0.4258 MPSSSSSWTVSSINLQFFTRIRRCLQSKSSRKRNHRSDQFHGSKSKSQSSDKKDEKAEVEKLETIKVMQKQSESIEEMEEEEENCEILLKRSVKKLHFGDWEEKEIAAKEIETMLKLDVKARKLIMELGVVPVLVSMVASDESSRRSSAVTALIQLADGSFTNKAIIVEAGILSKLPQRIDLMDESTSQIAELLLSLSSLSTTPFPFASLEFLPFLRDILQSNSSFGTKQLCLGAMFNLSTVLENAGPLVSTGFVPILLELSSEKQVSEKALASLGNLIVTLMGKKAVEESSMVPESFIEILSWEDKPKCQEISAYILMILAHQSSSQRQKMAKAGIVHVLLEVVLLGSTLAQKRASKLLQWFKDERQVRMGPHSGPQTSRTALSIGSPMNQMEAREGKRMMKNLVKESLHRNMTIITERANIASAESSSKFKSLIISTSSKSLPY 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0709 446 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 446 - -
Lele33g0709 446 SUPERFAMILY ARM repeat 94 360 IPR016024 -
Lele33g0709 446 MobiDBLite consensus disorder prediction 40 61 - -
Lele33g0709 446 MobiDBLite consensus disorder prediction 27 61 - -
Lele33g0709 446 Gene3D - 45 372 IPR011989 -
Lele33g0709 446 Coils Coil 68 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0709 Lele-ChrLele33 6019634 6023183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0709 95 361 U-box Gene Family AT3G46510 27.778 8.17e-18 84.3