Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0662 ATGTCAGAAGACGAACACGAGATTTATTATGACAAAGATAAGTGTGAGGAAACTACTTCACTGGGATCTTCTTCTCAGAAGTGTTCTTCGTTCGACTTGAATGAGGAAGCTACCAGTGAAGAAGAAGAAGAAGAAGAAGAGAAGGATCAGATAGATCTAGAAGCAGAAGAGGAGAAGGAGAAGATGAAGGAACATAATGAAGGGACTTCATCATCATCAAACAGAGAAAGAAATGAAGGAAAAAGCATAGTGAGACAATATGTGAGATCCAAGATGCCAAGGCTTCGATGGACTCCAGATCTTCATCTCTCTTTTGTTCATGCTGTTAAACGCCTTGGTGGTCAAGAGAGAGCAACACCAAAGTTGGTGCTTCAGCTAATGAATGTAAGAGGACTCAGCATTGCTCATGTGAAGAGTCACTTGCAGATGTATCGGAGTAAAAAACTTGATGAGGCTGGCCAAGTGATAAGTCAAACGTACAGATCCTCGCAAGTTGGTTGTATTTCTCAGTTGTCGTATCAAACAATGAATACAAGGCAACAATTCAAGATGGGAAACGGTGGAATTATTCTATCAACCAATTGCAACGACCATGCTGCGTTCGTTCATCATCATGCTCTCTCCAAGCCTTCTTTTACCCTTTCACACTCCCATACATCAATGGCCACAGATTCAAGGCACCAACCATGGTATAGAAGGCAAAGTTGCATGACAAACAAGGAAGTGATGATGATGCCCTCAACATCAGACCGAATTGCACCCATGAGACCCAGCCAATTTCTTGAAGAGAAAAAGTGGCCTCCATTAGAAATTATTACCAATAATAATATTAATAGTAATAATAATAATAATATTCAGCATTATTGGAAGTTCAAGAAAATGCCTGCGACCAGTAATATTTGGGCAGATACTAATAGCAGTATTCATGATTCACAATCTGGCCGATTTCACCAACTTGGCACCATGGAGCCACGGGATCGATGCAGTTTTGGAAATCATTTCAACAGTTCCAAGAGTTTGAAGCTGGAATTTGAGCCCCCATTTCGGATTAAGTTAAATGAAGAGAAAATGAAGAAAGACGAGCAATCGTTGCCCGATCTGCAACTCGGACTGAATTATCAGAATGCTGACCGTTGCAAGGAGACCCAAGAAATTAACACTAAGCTTTCTCTTTCTTAG 1179 0.4071 MSEDEHEIYYDKDKCEETTSLGSSSQKCSSFDLNEEATSEEEEEEEEKDQIDLEAEEEKEKMKEHNEGTSSSSNRERNEGKSIVRQYVRSKMPRLRWTPDLHLSFVHAVKRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVISQTYRSSQVGCISQLSYQTMNTRQQFKMGNGGIILSTNCNDHAAFVHHHALSKPSFTLSHSHTSMATDSRHQPWYRRQSCMTNKEVMMMPSTSDRIAPMRPSQFLEEKKWPPLEIITNNNINSNNNNNIQHYWKFKKMPATSNIWADTNSSIHDSQSGRFHQLGTMEPRDRCSFGNHFNSSKSLKLEFEPPFRIKLNEEKMKKDEQSLPDLQLGLNYQNADRCKETQEINTKLSLS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0662 392 FunFam Myb family transcription factor 91 149 - -
Lele33g0662 392 MobiDBLite consensus disorder prediction 35 53 - -
Lele33g0662 392 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 70 204 - -
Lele33g0662 392 MobiDBLite consensus disorder prediction 1 18 - -
Lele33g0662 392 MobiDBLite consensus disorder prediction 1 82 - -
Lele33g0662 392 Coils Coil 34 68 - -
Lele33g0662 392 Pfam Myb-like DNA-binding domain 95 145 IPR001005 -
Lele33g0662 392 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 149 IPR017930 -
Lele33g0662 392 SUPERFAMILY Homeodomain-like 91 147 IPR009057 -
Lele33g0662 392 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 93 148 IPR006447 GO:0003677
Lele33g0662 392 MobiDBLite consensus disorder prediction 54 82 - -
Lele33g0662 392 MobiDBLite consensus disorder prediction 19 33 - -
Lele33g0662 392 Gene3D - 92 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0662 Lele-ChrLele33 5242288 5246352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0662 84 164 G2-like Transcription Factor Family AT2G42660 71.605 8.97e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele33g0662 Myb_DNA-binding 7.7e-07 CL0123