Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0660 ATGATAATTCCAAATCAAGAGCCATCAAATTCTGGATCGTCCTCCAGCGAATCAACTTCCAATCACTACGATGTTTTCCTCAATTTCACAACCGAATCAACATTCACTGCCGCTCTCTGCGATGCTTTGCGCAAGAAGGGAATCGAGAAAATCTTCGTAGACCCCAAGAAACTGAGGAAAAGGAAGAGGAAGAGGAAGAGGAAACAAGTTTCTGCATCACCTGATTCTCTTAAAGCAATTAAAAAATCAAAGGTTTATATTCTTGTGTTCTCTGAGGATTATGCTTCTTCCGCTGATTGCCTTGATGAGCTGGTCAAGATTATGAAGTGCAAGAGGAGAAAGGAGCGAGTGGTTTTGCCGATCTTCTACAAAGTAGAACCAACGGTTGTTCGGCATCAGAAAAATGTGTATGGAGAAGCCATGGATGCTCATCAACGGAGTTTCGGACACGAACGGGTTAAGAAATGGAAGTCGGCTTTGAAGAAAGCCGCTAATTTGTCCGGATGGCATTTTGAACAAGTATCTGAATATGACTTTGTTGAGATTGTTGAAGCGGCGTTTTCCAAGTTACCGCCTCAACGCTTACATATTGGGGAGCACATAGTTGGACTCAACACTTGCATAAAAGATGTGACTTCACTTCTTGATACTGTCTCCATTTTAGGAATTCATGGAACTGCAGGAATTGGCAAAACGACACTTGCCAAAGCTGCATACAATTCAATTGTCCGCCAATTTGAAGAGGCTTGTTTTCTTACCGACATCAGAAAAGCTCCAAAAGGAAGGAAAGGCATGGTACGCCTTCAAAAGACAATTCTATCAGAGATTCTTGATGAGAAGAAAAAGATCGAGTTAGTAAGTGTTGATGAAGGGACCTCTAAGATAAAGCAGAGGCTATGCCATAGAAGAGTTCTTCTTGTTCTTGATGACGTGGATGAGAGGAAACAATTAAAACAACTCGTGGGAGGTTGCCGTGATTGGTGTGGAAATGGTAGCAAAGTAATTGTAACAACAAGAAATAAGAAATTATTGATTGATTGTCATATTGATAATGAATATGGAATGAAGAAGCTGAATAACGATGACTCTCTTGAGCTTTTCTCTCGGTATGCCTTCCACTTGGACAAACCTCCAGTCGAGTATGAAGAAATGTCCAAACGTTTGGTGTGTTATGCACAAGGCCTTCCTTTGGCTTTGAAAGAGATGGGCTCCAAATTAAATAATAAAAGCATGGACGCATGGAAATGTGCATTGGATCAATTGGAGAGACTTCCAGAAAGGAAGGTTGAAGATGTTCTCAGAATAATGGGAAGTCGGATGCTCGAGAACAGTTAA 1335 0.4112 MIIPNQEPSNSGSSSSESTSNHYDVFLNFTTESTFTAALCDALRKKGIEKIFVDPKKLRKRKRKRKRKQVSASPDSLKAIKKSKVYILVFSEDYASSADCLDELVKIMKCKRRKERVVLPIFYKVEPTVVRHQKNVYGEAMDAHQRSFGHERVKKWKSALKKAANLSGWHFEQVSEYDFVEIVEAAFSKLPPQRLHIGEHIVGLNTCIKDVTSLLDTVSILGIHGTAGIGKTTLAKAAYNSIVRQFEEACFLTDIRKAPKGRKGMVRLQKTILSEILDEKKKIELVSVDEGTSKIKQRLCHRRVLLVLDDVDERKQLKQLVGGCRDWCGNGSKVIVTTRNKKLLIDCHIDNEYGMKKLNNDDSLELFSRYAFHLDKPPVEYEEMSKRLVCYAQGLPLALKEMGSKLNNKSMDAWKCALDQLERLPERKVEDVLRIMGSRMLENS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0660 444 CDD AAA 223 313 - -
Lele33g0660 444 Gene3D - 19 190 IPR035897 -
Lele33g0660 444 SMART till_3 22 166 IPR000157 GO:0007165
Lele33g0660 444 Gene3D - 191 352 IPR027417 -
Lele33g0660 444 Pfam TIR domain 23 171 IPR000157 GO:0007165
Lele33g0660 444 PRINTS Disease resistance protein signature 392 406 - -
Lele33g0660 444 PRINTS Disease resistance protein signature 220 235 - -
Lele33g0660 444 PRINTS Disease resistance protein signature 298 312 - -
Lele33g0660 444 Gene3D - 357 438 IPR042197 -
Lele33g0660 444 ProSiteProfiles TIR domain profile. 21 190 IPR000157 GO:0007165
Lele33g0660 444 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 428 IPR044974 GO:0006952
Lele33g0660 444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 435 IPR027417 -
Lele33g0660 444 Pfam NB-ARC domain 219 424 IPR002182 GO:0043531
Lele33g0660 444 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 169 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0660 Lele-ChrLele33 5000679 5002502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0660 75 404 WRKY Transcription Factor Family AT4G12020 30.357 4.82e-37 142