Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0659 ATGGGGGTTAGATGGAACCAATTTGGATTATGGTTCAAAATATATATTGTCTTGATTTCTTTGTGGAAATTTCAAGTGTGTTGGTCGCTGAACAACGAAGGGTTATCCTTGTTGGAGTTCCGAGGTAGAATAACATCTGATCCGTATGGAGTTTTGATGAATTGGAATCTAAAGGATGGTAGCCCTTGCAAGTGGTTGGGTGTTCGTTGCATTGACAGTAAAGTTCAAATTCTTGACTTAAACTCCTTGTCTTTGGAAGGGACATTGGGCCCAGAGCTTGGGAAACTTGGTCACTTAAAATTTCTGGTGTTGTGCAAGAACAATTTCTCTGGACCCATTCCCAAGGAACTTGGAGGTTTAGCCAAATTGGAGTTACTGGATTTAAGGGACAATAAGTTTACTGGTAGTATTCCAGGGGAAATTAGCAGCTTATCAGAACTAAAACACTTGTTGCTTTGTGGCAATAAAATTGAAGTCAATGTTTGCCAAGGCGTTGAAAAGCCTAAAGTACCCTCTAAATGGTTATTCGTTGACAAGTGTACTTCACCTATAACTTCTGCTTTTGGTGGCTTGAATAGAAAATTTGGAAATGGTGAATGGCAGAGAAATTTTATATGGTTAAACAAGGCTGTTTCTATAGTTATTCAAATTAAAGGAGAACTTGTGAAATACTTCAATGCTTTGGTGCCACCATTGTTGAAGCTAGATAAAGCTATTGATTTTTGTCAAGTGAATTTCTATCACAATCAGCATGATTTTCACGAGCCTGGGATTGCCCAAACTATTCCAAACCTCGTCAATTCTGCACGTCGCAAGTTACTTGAACAATCTAGTAACCTTGCAGCTGCACCTGTCAGTGTTGGTCATCCTAAAACTATTATTTCTCTTCCAACAAGCTTGAGTAGTGGAGCTTTCCCAGCTGTGTCAAATGCCAAGCAACAAAATCTATCACCTGCAACACCTCCAACTGCTAATTCTCTACCTATTACTCCAAATCAAGACCAAGCTTCTACTGGGAAACAAGAACATTCAACTAAAGGCACTTCTGAAAATTTGTGGATTTATATACTTATTATCATTGCATTTATGGTTGCATTGGTCATTATTCCTGTGGCTATATTTTGTCTGTGGAGAGCACGAGCAGCCAAAACAATTAGCCCTTGGAAAACAGGAATAAGTGGACAGTTGCAAAAGGCATTTGTAACAGGGGTTCCTAAGCTGAATCGACCAGAGCTGGAGACAGCCTGTGAGGATTTCAGCAATATTGTTGATAACTTTGATGATTACACCATATACAAGGGAACATTGTCCAGTGGAGTTGAGATCGCAGTTGTTTCTACTATTGTCACTTCTTCTAAAGAATGGTCAAAGAATGCAGAGATGCTATACAGGAGAAGGATCAGTACATTGTCTCGTGTGAACCATAAGAACTTTATCAATCTTATTGGCTTTTGTGAGGAAGAACAACCATTCACAAGGATGATGGTTTTTGAGTATGCTCCTAATGGTACATTGTTTGAGCATCTCCACGTTAAGGAAAATGAACATCTTGATTGGACGGCAAGGATGAGGATTATTATGGGAATTGCTTATTGTTTGCAGTACATGCACCATGATCTAAATCCACCAGTACTGCCTTGCAACCTTGCTTCATCTTCCATTTTTTTAACAGATGATTTTGCTGCTAAGATGGCATTAATCAGTTTTGACAAGCCATTGATAGAAGATGAGCCAACTGAAGGAAAAGGGTATAGTCGTTCTCAGTTGCCACCCAATGCAGACCCTGAAACAAATGTTTATCATTTTGGGATGGTGTTGCTTGAAATAATCTCCGGGAAACTCCCTTACTCAGAAGAACAAGGTCATCTCACTGAATTGGTTGCTGAGCACATCAAAAACAACAGAAGCATCAATTGCACGATTGATCCCATTCTGCAATCATACGAAAAGGATGAACTTGATGTCATTTGTGTAGTAATACATGATTGCATTCAAACTAATCCAACGTTAAGACCTACAATGAAGGATATAGTTTTTAAATTGAGGGAAGTCATCTGTATATCGCCTGAACAAGCAGTTCCAAGGCTTTCCCCTCTTTGGTGGGCCGAACTAGAAATACTGTCCCTTGAGACTAATTAG 2139 0.3932 MGVRWNQFGLWFKIYIVLISLWKFQVCWSLNNEGLSLLEFRGRITSDPYGVLMNWNLKDGSPCKWLGVRCIDSKVQILDLNSLSLEGTLGPELGKLGHLKFLVLCKNNFSGPIPKELGGLAKLELLDLRDNKFTGSIPGEISSLSELKHLLLCGNKIEVNVCQGVEKPKVPSKWLFVDKCTSPITSAFGGLNRKFGNGEWQRNFIWLNKAVSIVIQIKGELVKYFNALVPPLLKLDKAIDFCQVNFYHNQHDFHEPGIAQTIPNLVNSARRKLLEQSSNLAAAPVSVGHPKTIISLPTSLSSGAFPAVSNAKQQNLSPATPPTANSLPITPNQDQASTGKQEHSTKGTSENLWIYILIIIAFMVALVIIPVAIFCLWRARAAKTISPWKTGISGQLQKAFVTGVPKLNRPELETACEDFSNIVDNFDDYTIYKGTLSSGVEIAVVSTIVTSSKEWSKNAEMLYRRRISTLSRVNHKNFINLIGFCEEEQPFTRMMVFEYAPNGTLFEHLHVKENEHLDWTARMRIIMGIAYCLQYMHHDLNPPVLPCNLASSSIFLTDDFAAKMALISFDKPLIEDEPTEGKGYSRSQLPPNADPETNVYHFGMVLLEIISGKLPYSEEQGHLTELVAEHIKNNRSINCTIDPILQSYEKDELDVICVVIHDCIQTNPTLRPTMKDIVFKLREVICISPEQAVPRLSPLWWAELEILSLETN 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0659 712 Pfam Protein tyrosine and serine/threonine kinase 431 681 IPR001245 GO:0004672|GO:0006468
Lele33g0659 712 Gene3D Phosphorylase Kinase; domain 1 394 499 - -
Lele33g0659 712 ProSiteProfiles Protein kinase domain profile. 294 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0659 712 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lele33g0659 712 Gene3D Transferase(Phosphotransferase) domain 1 500 691 - -
Lele33g0659 712 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Lele33g0659 712 SUPERFAMILY L domain-like 31 159 - -
Lele33g0659 712 MobiDBLite consensus disorder prediction 311 344 - -
Lele33g0659 712 FunFam Inactive receptor-like serine/threonine-protein kinase 391 499 - -
Lele33g0659 712 FunFam Leucine-rich repeat receptor-like kinase 35 140 - -
Lele33g0659 712 Gene3D Ribonuclease Inhibitor 29 174 IPR032675 -
Lele33g0659 712 PANTHER PROTEIN MALE DISCOVERER 2 16 709 - -
Lele33g0659 712 SUPERFAMILY Protein kinase-like (PK-like) 430 680 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0659 Lele-ChrLele33 4992170 4997064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0659 75 694 Receptor kinase-like Gene Family AT5G65700 25.144 3.16e-42 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele33g0659 PK_Tyr_Ser-Thr 9.6e-17 CL0016