Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0658 ATGTATAGGAAAATTATGACCGCATATTTCAAGTGTCCCAAATGGTTCTCACCTCAAACCAGAAGGATTGTCACCACAATTCTCGATCCAAATCCAAGAACAAGAGCAAGTATTGCAAAGATTACGGAAAATGGCTGGTTTAAAATCGGGTATCAGCAGATTGAACCATCCAAATCACCAGTTTCCAATCCAGTGAATGATGTTCAGGCTGTTTTTGATTCTTCATCATCATCAAGTCCAGAGGAAAAAACCCAAGAGATTACCCCAATGAAAGTGAAACCGTCTGTCTTCAATGCGTTCGACATAATATCCCTATCTTCAGGATTTGATCTCTCTGGTTTGTTTGAGGAAGATAAGTGTCGGAGACAACATGCTAGATTCACCACCACGAAGTCGACCTCAACGATTGTGTCGAAACTGGAAGAAATAGCACAATCAGAACGCAAATTCAAGGTTATGAAGAAAGATTGTGGAACAGTGAATTGGAGGGAAGCAAAACAGGATGGTAAGTCTCACCCTTGGGTTCCTAAGTTGAATCGATCAGAGCTGGAGACAGCCTGTGAGGATTTCAGCAATATTGTTGATAACTTTGATGATTACACCATATACAAGGGAACACTGTCCAGTGGAGTTGAGATCGCAGTTGTTTCTACTATTGTCACTTCTTCTAAAGAAGGGTCAAAGAATGCAGAGATGCTATACAGGAGAAGGATCAGTACATTGTCTCGTGTGAACCATAAGAACTTTATCAATCTTATTGGCTTTTGTGAGGAAGAACAACCATTCACAAGGATGATGGTTTTTGAGTATGCTCCTAATGGTACCTTGTTTGAGCATCTCCACGTTAAGGAAAATGAACATCTTGATTGGACTGCAAGGATGAGGATTATTATGGGAATTGCTTATTGTTTGCAGTACATGCACCATGATCTAAATCCACCAGTATTGCCTTGCAACCTTACTTCATCTTCCATTTTTCTAACAGATGATTTTGCTGCTAAGATGGCATTAATCAGTTTTGACAAGCCATTGATAGAAGATGAGCCAACTGAAGGAAAAAGGTCTAGTCGTTCTCAGTTGCCACCCTATGCAGATCCTGAAACAAATGTTTATCATTTTAGAATGGTGTTGCTTGAAATAATTTCTGGGAAACTCCCTTACTCTGAAGAACAAGGTCATATCACTGAATTGGTTGCTGAACACATCAAAAACAACAGAAGTATCAATTGCATGATTGATCCTATTCTGCAATCATACAAAAAGGAACTTGATGTCATTTGTGTAGCAATACATGATTGCATTCAAACTAATCCAAGTTTAAGACCTACAATGAAGGATATAGTTTCTAAATTGAGGAAGTCATCTGTATATCACCTGAACAAGCAGTTCTAA 1392 0.3886 MYRKIMTAYFKCPKWFSPQTRRIVTTILDPNPRTRASIAKITENGWFKIGYQQIEPSKSPVSNPVNDVQAVFDSSSSSSPEEKTQEITPMKVKPSVFNAFDIISLSSGFDLSGLFEEDKCRRQHARFTTTKSTSTIVSKLEEIAQSERKFKVMKKDCGTVNWREAKQDGKSHPWVPKLNRSELETACEDFSNIVDNFDDYTIYKGTLSSGVEIAVVSTIVTSSKEGSKNAEMLYRRRISTLSRVNHKNFINLIGFCEEEQPFTRMMVFEYAPNGTLFEHLHVKENEHLDWTARMRIIMGIAYCLQYMHHDLNPPVLPCNLTSSSIFLTDDFAAKMALISFDKPLIEDEPTEGKRSSRSQLPPYADPETNVYHFRMVLLEIISGKLPYSEEQGHITELVAEHIKNNRSINCMIDPILQSYKKELDVICVAIHDCIQTNPSLRPTMKDIVSKLRKSSVYHLNKQF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0658 463 SUPERFAMILY Protein kinase-like (PK-like) 201 451 IPR011009 -
Lele33g0658 463 Gene3D Kinase associated domain 1, KA1 94 176 - -
Lele33g0658 463 Pfam Protein tyrosine and serine/threonine kinase 202 451 IPR001245 GO:0004672|GO:0006468
Lele33g0658 463 Gene3D Transferase(Phosphotransferase) domain 1 271 461 - -
Lele33g0658 463 SUPERFAMILY Protein kinase-like (PK-like) 2 88 IPR011009 -
Lele33g0658 463 Gene3D Phosphorylase Kinase; domain 1 177 270 - -
Lele33g0658 463 Pfam NAF domain 94 154 IPR004041 GO:0007165
Lele33g0658 463 ProSiteProfiles NAF domain profile. 92 116 IPR018451 GO:0007165
Lele33g0658 463 CDD CIPK_C 98 172 - -
Lele33g0658 463 FunFam Inactive receptor-like serine/threonine-protein kinase 170 270 - -
Lele33g0658 463 PANTHER PROTEIN MALE DISCOVERER 2 90 452 - -
Lele33g0658 463 ProSiteProfiles Protein kinase domain profile. 188 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0658 Lele-ChrLele33 4980659 4986018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0658 1 172 CBL-interacting serine-threonine protein kinases AT5G45820 44.068 7.16e-38 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele33g0658 PK_Tyr_Ser-Thr 1.4e-16 CL0016