Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0654 ATGTATAGGAAAATTAGGACCGCAGATTTCAAGTGTCCCAAATGGTTCTCACCTCAAACCAGAAGGATTGTCACCAGAATTCTCGATCCAAATCCAAGAACAAGAGTAAGTATTGCAAAGATTACGGAATATGGCTGGTTTAAAAGCGGGTATCAGCAGATTGAACCATCCAAATCACCAGTTTCCAATCCAGTGAATGATGTTCAGGCTATTTTTGATTCTTCATCATCATCAAGTCCAGAGGAAAAAACCCAAGAAATTACCCCAATGAAAGTGAAACCGTCTGTCTTCAATGCGTTCGACATAATATCCCTATCTTCAGGATTTGATCTCTCTGGTTTGTTTGAGGAAGATAAGTGTCGGAGACAACATGCTAGGTTCACCACCACGAAGTCGGCCTCAACGATTGTGTCAAAACTGGAAGAAATAGCACAATCAGAAAGCAAATTCAAGGTTATGAAGAAATATTGTGGAACAGTGAGATTGGAGGGAAGCAAAACAGGTCGGAAGGGGCAACTTGGTATCGATGCAGAGATTTTTGAGGTGACATCGACGTTTCACGTTGTGGAGGTGAAGAAAACTGCAGGCGATACGTTTGAGTTTATACAGCTTCGGGATCAGTTGAAGCTAGATAAAGCTATTGATTTTTGTCAAGTGAATTTCTATCACAATCAACATGATTTTCACGATTCCGGGATTGCCCAAACTATACCAAACCTCATCAATTCTGCACGTCGCAAGTTACTTGAACAATCCAGTAACCTTGCAGCTGCACCTGTCAGTGTTGGTCATCCTAAAACTATTATTTCTCTTCCAACAAGCTTGAGTAGTGGAGCTTTCCCAGCTGTGTCAAATACCAAGCAACAAAATCTATCACCTGCAACACCTCCAACTGCTAATTCACTACCTATTACTCCGAATCAAGAACAATCTTCTACTGGGAAACAAGAACATTCAACTAAAGCCAAAACAATTAGCCCTTGGAGAATAGGAATAAGTGGACAGTTGCAAAAGGCATTTGTAACAGGGGTTCCTAAGCTGAATCGACCAGAGCTGGAGATTGCCTGTGAGGATTTCAGCAATATTGTTGATAACTTTAATGATTACACCATATACAAGGGAGCACTGTCCAGTGGAGTTGAGATCGCAGTTGTTTCTACTATTGTCACTTCTTCTAAAGAATGTACATTGTCTCGTGTGAACCATAAGAACTTTATCAATCTTATTGGCTTTTGTGAGGAAGAACAACCATTCACGAGGATGATGGTTTTTGAGTATGCTCCAAATGGTACCTTGTTTGAGCATCTCCATGTTAAGGAAAATGAACATCTTGATTGGACCGAGAGGACGAGGATTATTATGGGAATTGCTTATTGTTTGCAGTACATGCACCATGATCTAAATCCACCAGTATTGCCTTGCAACCTTACTTCATCTTCCATTTTTTTAACAGATGATTTTGCTGCTAAGATGGCATTAATCAGTTTTGACAAGCCATTGATAGAAGATGAGCCAACTAAAGGAAAATGGTCTAGTCATTCTCAGTTGCCGCCCGATGCAGATCCTGAAACAAATGTTTATCATTTTGGAATGGTGTTGCTTGAAATAATTTCTGGGAAACTCCCTCACTCTGAAGAATAA 1641 0.4022 MYRKIRTADFKCPKWFSPQTRRIVTRILDPNPRTRVSIAKITEYGWFKSGYQQIEPSKSPVSNPVNDVQAIFDSSSSSSPEEKTQEITPMKVKPSVFNAFDIISLSSGFDLSGLFEEDKCRRQHARFTTTKSASTIVSKLEEIAQSESKFKVMKKYCGTVRLEGSKTGRKGQLGIDAEIFEVTSTFHVVEVKKTAGDTFEFIQLRDQLKLDKAIDFCQVNFYHNQHDFHDSGIAQTIPNLINSARRKLLEQSSNLAAAPVSVGHPKTIISLPTSLSSGAFPAVSNTKQQNLSPATPPTANSLPITPNQEQSSTGKQEHSTKAKTISPWRIGISGQLQKAFVTGVPKLNRPELEIACEDFSNIVDNFNDYTIYKGALSSGVEIAVVSTIVTSSKECTLSRVNHKNFINLIGFCEEEQPFTRMMVFEYAPNGTLFEHLHVKENEHLDWTERTRIIMGIAYCLQYMHHDLNPPVLPCNLTSSSIFLTDDFAAKMALISFDKPLIEDEPTKGKWSSHSQLPPDADPETNVYHFGMVLLEIISGKLPHSEE 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0654 546 MobiDBLite consensus disorder prediction 284 324 - -
Lele33g0654 546 Gene3D Kinase associated domain 1, KA1 92 214 - -
Lele33g0654 546 PANTHER PROTEIN MALE DISCOVERER 2 319 545 - -
Lele33g0654 546 ProSiteProfiles Protein kinase domain profile. 269 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0654 546 FunFam Inactive receptor-like serine/threonine-protein kinase 331 426 - -
Lele33g0654 546 Gene3D Transferase(Phosphotransferase) domain 1 370 546 - -
Lele33g0654 546 MobiDBLite consensus disorder prediction 284 323 - -
Lele33g0654 546 SUPERFAMILY Protein kinase-like (PK-like) 2 89 IPR011009 -
Lele33g0654 546 FunFam Non-specific serine/threonine protein kinase 92 214 - -
Lele33g0654 546 Pfam NAF domain 94 154 IPR004041 GO:0007165
Lele33g0654 546 ProSiteProfiles NAF domain profile. 92 116 IPR018451 GO:0007165
Lele33g0654 546 SUPERFAMILY Protein kinase-like (PK-like) 395 544 IPR011009 -
Lele33g0654 546 CDD CIPK_C 98 209 - -
Lele33g0654 546 Pfam Protein tyrosine and serine/threonine kinase 396 543 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0654 Lele-ChrLele33 4937003 4940015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0654 1 207 CBL-interacting serine-threonine protein kinases AT5G45820 48.113 1.70e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele33g0654 PK_Tyr_Ser-Thr 1.6e-10 CL0016